Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SMSP52788 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMSP52788 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMSP52788 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMSP52788 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMSP52788 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.79■□□□□ 0.76
SMSP52788 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.79■□□□□ 0.76
SMSP52788 TERF1P2-201ENST00000583350 1212 ntBASIC19.79■□□□□ 0.76
SMSP52788 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.79■□□□□ 0.76
SMSP52788 AL499627.2-201ENST00000606283 725 ntBASIC19.79■□□□□ 0.76
SMSP52788 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.79■□□□□ 0.76
SMSP52788 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMSP52788 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SMSP52788 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMSP52788 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMSP52788 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMSP52788 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.78■□□□□ 0.76
SMSP52788 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.78■□□□□ 0.76
SMSP52788 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMSP52788 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMSP52788 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMSP52788 OR2I1P-207ENST00000453522 948 ntBASIC19.78■□□□□ 0.76
SMSP52788 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.78■□□□□ 0.76
SMSP52788 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.78■□□□□ 0.76
SMSP52788 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMSP52788 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.78■□□□□ 0.76
SMSP52788 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.78■□□□□ 0.76
SMSP52788 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.78■□□□□ 0.76
SMSP52788 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMSP52788 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMSP52788 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.78■□□□□ 0.76
SMSP52788 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.78■□□□□ 0.76
SMSP52788 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMSP52788 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.77■□□□□ 0.76
SMSP52788 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SMSP52788 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SMSP52788 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMSP52788 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMSP52788 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMSP52788 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.77■□□□□ 0.76
SMSP52788 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.77■□□□□ 0.76
SMSP52788 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMSP52788 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.77■□□□□ 0.76
SMSP52788 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
SMSP52788 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.77■□□□□ 0.75
SMSP52788 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.76■□□□□ 0.75
SMSP52788 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.76■□□□□ 0.75
SMSP52788 AC244015.2-201ENST00000616358 1861 ntBASIC19.76■□□□□ 0.75
SMSP52788 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMSP52788 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.76■□□□□ 0.75
SMSP52788 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.76■□□□□ 0.75
SMSP52788 AP005435.1-201ENST00000529293 1178 ntBASIC19.76■□□□□ 0.75
SMSP52788 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.76■□□□□ 0.75
SMSP52788 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SMSP52788 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
SMSP52788 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMSP52788 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.76■□□□□ 0.75
SMSP52788 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.76■□□□□ 0.75
SMSP52788 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMSP52788 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMSP52788 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMSP52788 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SMSP52788 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
SMSP52788 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMSP52788 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMSP52788 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMSP52788 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SMSP52788 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMSP52788 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.75■□□□□ 0.75
SMSP52788 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMSP52788 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMSP52788 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMSP52788 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.75■□□□□ 0.75
SMSP52788 AC004687.1-201ENST00000579003 1625 ntBASIC19.75■□□□□ 0.75
SMSP52788 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMSP52788 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMSP52788 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMSP52788 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
SMSP52788 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.75■□□□□ 0.75
SMSP52788 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMSP52788 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMSP52788 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
SMSP52788 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMSP52788 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMSP52788 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMSP52788 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMSP52788 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMSP52788 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.74■□□□□ 0.75
SMSP52788 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMSP52788 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMSP52788 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMSP52788 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMSP52788 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMSP52788 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
SMSP52788 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.74■□□□□ 0.75
SMSP52788 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.74■□□□□ 0.75
SMSP52788 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMSP52788 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMSP52788 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMSP52788 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms