Protein–RNA interactions for Protein: P48547

KCNC1, Potassium voltage-gated channel subfamily C member 1, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1P48547 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNC1P48547 AC099791.1-201ENST00000416440 715 ntBASIC20.82■□□□□ 0.92
KCNC1P48547 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KCNC1P48547 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.82■□□□□ 0.92
KCNC1P48547 IGHV3-19-201ENST00000521488 291 ntBASIC20.82■□□□□ 0.92
KCNC1P48547 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
KCNC1P48547 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.82■□□□□ 0.92
KCNC1P48547 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.82■□□□□ 0.92
KCNC1P48547 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNC1P48547 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNC1P48547 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNC1P48547 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNC1P48547 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNC1P48547 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNC1P48547 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNC1P48547 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNC1P48547 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNC1P48547 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNC1P48547 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNC1P48547 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.81■□□□□ 0.92
KCNC1P48547 AC110285.6-201ENST00000617652 491 ntBASIC20.81■□□□□ 0.92
KCNC1P48547 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNC1P48547 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNC1P48547 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNC1P48547 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNC1P48547 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
KCNC1P48547 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.81■□□□□ 0.92
KCNC1P48547 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.8■□□□□ 0.92
KCNC1P48547 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNC1P48547 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNC1P48547 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.8■□□□□ 0.92
KCNC1P48547 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.8■□□□□ 0.92
KCNC1P48547 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.8■□□□□ 0.92
KCNC1P48547 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.8■□□□□ 0.92
KCNC1P48547 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
KCNC1P48547 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KCNC1P48547 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.8■□□□□ 0.92
KCNC1P48547 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNC1P48547 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNC1P48547 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.79■□□□□ 0.92
KCNC1P48547 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KCNC1P48547 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.79■□□□□ 0.92
KCNC1P48547 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KCNC1P48547 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNC1P48547 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.79■□□□□ 0.92
KCNC1P48547 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.79■□□□□ 0.92
KCNC1P48547 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.79■□□□□ 0.92
KCNC1P48547 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.79■□□□□ 0.92
KCNC1P48547 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.79■□□□□ 0.92
KCNC1P48547 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNC1P48547 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.79■□□□□ 0.92
KCNC1P48547 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KCNC1P48547 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNC1P48547 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNC1P48547 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNC1P48547 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNC1P48547 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNC1P48547 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNC1P48547 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNC1P48547 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
KCNC1P48547 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.78■□□□□ 0.92
KCNC1P48547 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KCNC1P48547 AP001330.3-201ENST00000520123 633 ntBASIC20.78■□□□□ 0.92
KCNC1P48547 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KCNC1P48547 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
KCNC1P48547 AL031432.3-201ENST00000607698 485 ntBASIC20.78■□□□□ 0.92
KCNC1P48547 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNC1P48547 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KCNC1P48547 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KCNC1P48547 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNC1P48547 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
KCNC1P48547 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNC1P48547 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
KCNC1P48547 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.77■□□□□ 0.92
KCNC1P48547 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNC1P48547 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNC1P48547 EDA-201ENST00000338901 1233 ntBASIC20.77■□□□□ 0.92
KCNC1P48547 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNC1P48547 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.77■□□□□ 0.92
KCNC1P48547 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.77■□□□□ 0.92
KCNC1P48547 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.77■□□□□ 0.92
KCNC1P48547 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.77■□□□□ 0.92
KCNC1P48547 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.77■□□□□ 0.92
KCNC1P48547 AL139246.5-201ENST00000606645 996 ntBASIC20.77■□□□□ 0.92
KCNC1P48547 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
KCNC1P48547 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.77■□□□□ 0.92
KCNC1P48547 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.77■□□□□ 0.92
KCNC1P48547 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNC1P48547 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNC1P48547 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
KCNC1P48547 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.77■□□□□ 0.91
KCNC1P48547 TSPY26P-201ENST00000476365 1326 ntBASIC20.77■□□□□ 0.91
KCNC1P48547 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
KCNC1P48547 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
KCNC1P48547 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNC1P48547 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNC1P48547 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
KCNC1P48547 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNC1P48547 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
KCNC1P48547 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms