Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 SPF1YEL031W 3648 nt2.44□□□□□ -2.02
LSM1P47017 AXL1YPR122W 3627 nt2.44□□□□□ -2.02
LSM1P47017 TLC1TLC1 1301 nt2.44□□□□□ -2.02
LSM1P47017 PHO2YDL106C 1680 nt2.44□□□□□ -2.02
LSM1P47017 PBS2YJL128C 2007 nt2.44□□□□□ -2.02
LSM1P47017 PEF1YGR058W 1008 nt2.44□□□□□ -2.02
LSM1P47017 SOL3YHR163W 750 nt2.44□□□□□ -2.02
LSM1P47017 ATG27YJL178C 816 nt2.44□□□□□ -2.02
LSM1P47017 SMA2YML066C 1110 nt2.44□□□□□ -2.02
LSM1P47017 ITT1YML068W 1395 nt2.44□□□□□ -2.02
LSM1P47017 VHR1YIL056W 1923 nt2.44□□□□□ -2.02
LSM1P47017 RPO41YFL036W 4056 nt2.44□□□□□ -2.02
LSM1P47017 AI2Q0055 2565 nt2.44□□□□□ -2.02
LSM1P47017 TMA64YDR117C 1698 nt2.44□□□□□ -2.02
LSM1P47017 BNI4YNL233W 2679 nt2.44□□□□□ -2.02
LSM1P47017 EAP1YKL204W 1899 nt2.43□□□□□ -2.02
LSM1P47017 SSN2YDR443C 4263 nt2.43□□□□□ -2.02
LSM1P47017 GCD10YNL062C 1437 nt2.43□□□□□ -2.02
LSM1P47017 SAK1YER129W 3429 nt2.43□□□□□ -2.02
LSM1P47017 YGR039WYGR039W 312 nt2.43□□□□□ -2.02
LSM1P47017 YKL156C-AYKL156C-A 117 nt2.43□□□□□ -2.02
LSM1P47017 POS5YPL188W 1245 nt2.43□□□□□ -2.02
LSM1P47017 PUS9YDL036C 1389 nt2.43□□□□□ -2.02
LSM1P47017 SEC26YDR238C 2922 nt2.43□□□□□ -2.02
LSM1P47017 SIN3YOL004W 4611 nt2.43□□□□□ -2.02
LSM1P47017 PIN4YBL051C 2007 nt2.42□□□□□ -2.02
LSM1P47017 PHO92YDR374C 921 nt2.42□□□□□ -2.02
LSM1P47017 NSA2YER126C 786 nt2.42□□□□□ -2.02
LSM1P47017 RPL24BYGR148C 468 nt2.42□□□□□ -2.02
LSM1P47017 NIT3YLR351C 876 nt2.42□□□□□ -2.02
LSM1P47017 YNL043CYNL043C 321 nt2.42□□□□□ -2.02
LSM1P47017 YOR342CYOR342C 960 nt2.42□□□□□ -2.02
LSM1P47017 GIN4YDR507C 3429 nt2.42□□□□□ -2.02
LSM1P47017 TRA1YHR099W 11235 nt2.42□□□□□ -2.02
LSM1P47017 AVT2YEL064C 1443 nt2.42□□□□□ -2.02
LSM1P47017 ROG1YGL144C 2058 nt2.41□□□□□ -2.02
LSM1P47017 YDR098C-BYDR098C-B 5268 nt2.41□□□□□ -2.02
LSM1P47017 YDR210C-DYDR210C-D 5268 nt2.41□□□□□ -2.02
LSM1P47017 YDR316W-BYDR316W-B 5268 nt2.41□□□□□ -2.02
LSM1P47017 YDR365W-BYDR365W-B 5268 nt2.41□□□□□ -2.02
LSM1P47017 YER138CYER138C 5268 nt2.41□□□□□ -2.02
LSM1P47017 YER160CYER160C 5268 nt2.41□□□□□ -2.02
LSM1P47017 YGR038C-BYGR038C-B 5268 nt2.41□□□□□ -2.02
LSM1P47017 YGR161C-DYGR161C-D 5268 nt2.41□□□□□ -2.02
LSM1P47017 YJR027WYJR027W 5268 nt2.41□□□□□ -2.02
LSM1P47017 YLR157C-BYLR157C-B 5268 nt2.41□□□□□ -2.02
LSM1P47017 YML039WYML039W 5268 nt2.41□□□□□ -2.02
LSM1P47017 YML045WYML045W 5268 nt2.41□□□□□ -2.02
LSM1P47017 YMR050CYMR050C 5268 nt2.41□□□□□ -2.02
LSM1P47017 YOL103W-BYOL103W-B 5268 nt2.41□□□□□ -2.02
LSM1P47017 YBR012W-BYBR012W-B 5271 nt2.41□□□□□ -2.02
LSM1P47017 YOR142W-BYOR142W-B 5268 nt2.41□□□□□ -2.02
LSM1P47017 YPL257W-BYPL257W-B 5268 nt2.41□□□□□ -2.02
LSM1P47017 YPR158W-BYPR158W-B 5271 nt2.41□□□□□ -2.02
LSM1P47017 IMG2YCR071C 441 nt2.41□□□□□ -2.02
LSM1P47017 RMD1YDL001W 1293 nt2.41□□□□□ -2.02
LSM1P47017 PAU10YDR542W 363 nt2.41□□□□□ -2.02
LSM1P47017 YER066C-AYER066C-A 501 nt2.41□□□□□ -2.02
LSM1P47017 YGL152CYGL152C 678 nt2.41□□□□□ -2.02
LSM1P47017 YIP5YGL161C 933 nt2.41□□□□□ -2.02
LSM1P47017 PAU11YGL261C 363 nt2.41□□□□□ -2.02
LSM1P47017 PAU13YHL046C 363 nt2.41□□□□□ -2.02
LSM1P47017 MRPL38YKL170W 417 nt2.41□□□□□ -2.02
LSM1P47017 RPS1AYLR441C 768 nt2.41□□□□□ -2.02
LSM1P47017 PAU4YLR461W 363 nt2.41□□□□□ -2.02
LSM1P47017 YOR062CYOR062C 807 nt2.41□□□□□ -2.02
LSM1P47017 THI80YOR143C 960 nt2.41□□□□□ -2.02
LSM1P47017 RRD2YPL152W 1077 nt2.41□□□□□ -2.02
LSM1P47017 TRM1YDR120C 1713 nt2.41□□□□□ -2.02
LSM1P47017 FAA2YER015W 2235 nt2.41□□□□□ -2.02
LSM1P47017 MLH1YMR167W 2310 nt2.4□□□□□ -2.02
LSM1P47017 PPH3YDR075W 927 nt2.4□□□□□ -2.03
LSM1P47017 BSC2YDR275W 708 nt2.4□□□□□ -2.03
LSM1P47017 YHL006W-AYHL006W-A 354 nt2.4□□□□□ -2.03
LSM1P47017 BAT1YHR208W 1182 nt2.4□□□□□ -2.03
LSM1P47017 RPL23AYBL087C 414 nt2.4□□□□□ -2.03
LSM1P47017 snR11snR11 258 nt2.4□□□□□ -2.03
LSM1P47017 JID1YPR061C 906 nt2.4□□□□□ -2.03
LSM1P47017 FAR11YNL127W 2862 nt2.39□□□□□ -2.03
LSM1P47017 VIP1YLR410W 3441 nt2.39□□□□□ -2.03
LSM1P47017 KRE33YNL132W 3171 nt2.39□□□□□ -2.03
LSM1P47017 CSF1YLR087C 8877 nt2.39□□□□□ -2.03
LSM1P47017 YDL199CYDL199C 2064 nt2.39□□□□□ -2.03
LSM1P47017 YOS1YER074W-A 258 nt2.39□□□□□ -2.03
LSM1P47017 MST27YGL051W 705 nt2.39□□□□□ -2.03
LSM1P47017 YHR137C-AYHR137C-A 651 nt2.39□□□□□ -2.03
LSM1P47017 YHR213WYHR213W 597 nt2.39□□□□□ -2.03
LSM1P47017 YAR062WYAR062W 597 nt2.39□□□□□ -2.03
LSM1P47017 VMA6YLR447C 1038 nt2.39□□□□□ -2.03
LSM1P47017 TEM1YML064C 738 nt2.39□□□□□ -2.03
LSM1P47017 HSP10YOR020C 321 nt2.39□□□□□ -2.03
LSM1P47017 HSH49YOR319W 642 nt2.39□□□□□ -2.03
LSM1P47017 TPK2YPL203W 1143 nt2.39□□□□□ -2.03
LSM1P47017 SWD3YBR175W 948 nt2.39□□□□□ -2.03
LSM1P47017 CTK1YKL139W 1587 nt2.39□□□□□ -2.03
LSM1P47017 PMS1YNL082W 2622 nt2.38□□□□□ -2.03
LSM1P47017 MRT4YKL009W 711 nt2.38□□□□□ -2.03
LSM1P47017 RPS29AYLR388W 171 nt2.38□□□□□ -2.03
LSM1P47017 MIC27YNL100W 705 nt2.38□□□□□ -2.03
LSM1P47017 RRG7YOR305W 729 nt2.38□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 24.4 ms