Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN3P20807 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN3P20807 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN3P20807 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CAPN3P20807 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN3P20807 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN3P20807 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.37■□□□□ 0.85
CAPN3P20807 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN3P20807 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.36■□□□□ 0.85
CAPN3P20807 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPN3P20807 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPN3P20807 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPN3P20807 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPN3P20807 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPN3P20807 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.36■□□□□ 0.85
CAPN3P20807 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.36■□□□□ 0.85
CAPN3P20807 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.36■□□□□ 0.85
CAPN3P20807 MIR6821-201ENST00000617625 74 ntBASIC20.36■□□□□ 0.85
CAPN3P20807 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPN3P20807 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CAPN3P20807 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.36■□□□□ 0.85
CAPN3P20807 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPN3P20807 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPN3P20807 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.36■□□□□ 0.85
CAPN3P20807 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CAPN3P20807 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPN3P20807 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.36■□□□□ 0.85
CAPN3P20807 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CAPN3P20807 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPN3P20807 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.35■□□□□ 0.85
CAPN3P20807 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPN3P20807 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPN3P20807 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.35■□□□□ 0.85
CAPN3P20807 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CAPN3P20807 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CAPN3P20807 AC099791.2-201ENST00000605725 427 ntBASIC20.35■□□□□ 0.85
CAPN3P20807 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.35■□□□□ 0.85
CAPN3P20807 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.35■□□□□ 0.85
CAPN3P20807 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
CAPN3P20807 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPN3P20807 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPN3P20807 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CAPN3P20807 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN3P20807 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CAPN3P20807 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN3P20807 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
CAPN3P20807 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
CAPN3P20807 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CAPN3P20807 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN3P20807 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN3P20807 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
CAPN3P20807 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.34■□□□□ 0.85
CAPN3P20807 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.34■□□□□ 0.85
CAPN3P20807 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.34■□□□□ 0.85
CAPN3P20807 AC068587.7-201ENST00000641602 218 ntBASIC20.34■□□□□ 0.85
CAPN3P20807 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN3P20807 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN3P20807 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.34■□□□□ 0.85
CAPN3P20807 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN3P20807 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN3P20807 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.34■□□□□ 0.85
CAPN3P20807 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN3P20807 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN3P20807 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.34■□□□□ 0.85
CAPN3P20807 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CAPN3P20807 LINC01006-201ENST00000333319 2292 ntBASIC20.33■□□□□ 0.85
CAPN3P20807 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CAPN3P20807 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CAPN3P20807 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CAPN3P20807 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CAPN3P20807 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CAPN3P20807 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CAPN3P20807 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
CAPN3P20807 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CAPN3P20807 OR2I1P-207ENST00000453522 948 ntBASIC20.33■□□□□ 0.85
CAPN3P20807 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.33■□□□□ 0.85
CAPN3P20807 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CAPN3P20807 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.33■□□□□ 0.84
CAPN3P20807 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CAPN3P20807 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN3P20807 OXCT2P1-201ENST00000447263 1535 ntBASIC20.32■□□□□ 0.84
CAPN3P20807 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN3P20807 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN3P20807 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN3P20807 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.32■□□□□ 0.84
CAPN3P20807 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN3P20807 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN3P20807 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN3P20807 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.32■□□□□ 0.84
CAPN3P20807 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN3P20807 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CAPN3P20807 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.32■□□□□ 0.84
CAPN3P20807 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.32■□□□□ 0.84
CAPN3P20807 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.32■□□□□ 0.84
CAPN3P20807 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.32■□□□□ 0.84
CAPN3P20807 MIR3181-201ENST00000578512 73 ntBASIC20.32■□□□□ 0.84
CAPN3P20807 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.32■□□□□ 0.84
CAPN3P20807 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CAPN3P20807 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.32■□□□□ 0.84
CAPN3P20807 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms