Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.56■■□□□ 1.2
CHRNB2P17787 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHRNB2P17787 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHRNB2P17787 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CHRNB2P17787 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.56■■□□□ 1.2
CHRNB2P17787 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.56■■□□□ 1.2
CHRNB2P17787 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.56■■□□□ 1.2
CHRNB2P17787 AC012414.1-201ENST00000556676 535 ntBASIC22.56■■□□□ 1.2
CHRNB2P17787 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CHRNB2P17787 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CHRNB2P17787 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHRNB2P17787 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHRNB2P17787 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHRNB2P17787 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHRNB2P17787 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CHRNB2P17787 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.55■■□□□ 1.2
CHRNB2P17787 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHRNB2P17787 AC142381.2-201ENST00000566120 298 ntBASIC22.55■■□□□ 1.2
CHRNB2P17787 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CHRNB2P17787 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.55■■□□□ 1.2
CHRNB2P17787 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.55■■□□□ 1.2
CHRNB2P17787 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHRNB2P17787 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHRNB2P17787 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.55■■□□□ 1.2
CHRNB2P17787 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHRNB2P17787 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHRNB2P17787 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHRNB2P17787 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHRNB2P17787 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.54■■□□□ 1.2
CHRNB2P17787 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.54■■□□□ 1.2
CHRNB2P17787 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CHRNB2P17787 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.54■■□□□ 1.2
CHRNB2P17787 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.54■■□□□ 1.2
CHRNB2P17787 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.54■■□□□ 1.2
CHRNB2P17787 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.54■■□□□ 1.2
CHRNB2P17787 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CHRNB2P17787 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.54■■□□□ 1.2
CHRNB2P17787 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.54■■□□□ 1.2
CHRNB2P17787 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHRNB2P17787 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CHRNB2P17787 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHRNB2P17787 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHRNB2P17787 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHRNB2P17787 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.53■■□□□ 1.2
CHRNB2P17787 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.53■■□□□ 1.2
CHRNB2P17787 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CHRNB2P17787 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHRNB2P17787 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
CHRNB2P17787 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHRNB2P17787 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.53■■□□□ 1.2
CHRNB2P17787 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.53■■□□□ 1.2
CHRNB2P17787 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHRNB2P17787 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.52■■□□□ 1.2
CHRNB2P17787 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHRNB2P17787 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHRNB2P17787 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHRNB2P17787 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.52■■□□□ 1.2
CHRNB2P17787 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.52■■□□□ 1.2
CHRNB2P17787 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.52■■□□□ 1.2
CHRNB2P17787 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.52■■□□□ 1.2
CHRNB2P17787 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHRNB2P17787 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHRNB2P17787 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CHRNB2P17787 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHRNB2P17787 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHRNB2P17787 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CHRNB2P17787 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.52■■□□□ 1.2
CHRNB2P17787 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
CHRNB2P17787 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHRNB2P17787 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
CHRNB2P17787 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CHRNB2P17787 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHRNB2P17787 MIR638-201ENST00000385237 100 ntBASIC22.51■■□□□ 1.19
CHRNB2P17787 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.51■■□□□ 1.19
CHRNB2P17787 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHRNB2P17787 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CHRNB2P17787 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CHRNB2P17787 TPRG1LP1-201ENST00000598702 760 ntBASIC22.51■■□□□ 1.19
CHRNB2P17787 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.51■■□□□ 1.19
CHRNB2P17787 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CHRNB2P17787 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.51■■□□□ 1.19
CHRNB2P17787 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHRNB2P17787 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.51■■□□□ 1.19
CHRNB2P17787 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.51■■□□□ 1.19
CHRNB2P17787 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
CHRNB2P17787 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.5■■□□□ 1.19
CHRNB2P17787 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHRNB2P17787 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHRNB2P17787 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.5■■□□□ 1.19
CHRNB2P17787 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.5■■□□□ 1.19
CHRNB2P17787 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CHRNB2P17787 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CHRNB2P17787 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHRNB2P17787 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CHRNB2P17787 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHRNB2P17787 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
CHRNB2P17787 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHRNB2P17787 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.49■■□□□ 1.19
CHRNB2P17787 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CHRNB2P17787 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms