Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC083906.2-201ENST00000511578 360 ntBASIC20.01■□□□□ 0.79
RAB40ALP0C0E4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.01■□□□□ 0.79
RAB40ALP0C0E4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB40ALP0C0E4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAB40ALP0C0E4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB40ALP0C0E4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB40ALP0C0E4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB40ALP0C0E4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB40ALP0C0E4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RAB40ALP0C0E4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RAB40ALP0C0E4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20■□□□□ 0.79
RAB40ALP0C0E4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RAB40ALP0C0E4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
RAB40ALP0C0E4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
RAB40ALP0C0E4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20■□□□□ 0.79
RAB40ALP0C0E4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20■□□□□ 0.79
RAB40ALP0C0E4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB40ALP0C0E4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB40ALP0C0E4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB40ALP0C0E4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB40ALP0C0E4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 TSPY6P-201ENST00000448518 926 ntBASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 AC142086.2-201ENST00000569753 217 ntBASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 AC233723.2-201ENST00000623798 2106 ntBASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40ALP0C0E4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB40ALP0C0E4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.98■□□□□ 0.79
RAB40ALP0C0E4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.98■□□□□ 0.79
RAB40ALP0C0E4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAB40ALP0C0E4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB40ALP0C0E4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.98■□□□□ 0.79
RAB40ALP0C0E4 CNN2P6-201ENST00000439038 900 ntBASIC19.98■□□□□ 0.79
RAB40ALP0C0E4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.98■□□□□ 0.79
RAB40ALP0C0E4 SLC7A5P2-201ENST00000553010 536 ntBASIC19.98■□□□□ 0.79
RAB40ALP0C0E4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB40ALP0C0E4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
RAB40ALP0C0E4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB40ALP0C0E4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB40ALP0C0E4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB40ALP0C0E4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB40ALP0C0E4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40ALP0C0E4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40ALP0C0E4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RAB40ALP0C0E4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.97■□□□□ 0.79
RAB40ALP0C0E4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40ALP0C0E4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40ALP0C0E4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.97■□□□□ 0.79
RAB40ALP0C0E4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.97■□□□□ 0.79
RAB40ALP0C0E4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40ALP0C0E4 AC013268.1-206ENST00000638368 961 ntBASIC19.97■□□□□ 0.79
RAB40ALP0C0E4 AC112229.1-201ENST00000639295 961 ntBASIC19.97■□□□□ 0.79
RAB40ALP0C0E4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40ALP0C0E4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RAB40ALP0C0E4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40ALP0C0E4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40ALP0C0E4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RAB40ALP0C0E4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40ALP0C0E4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.96■□□□□ 0.79
RAB40ALP0C0E4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAB40ALP0C0E4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RAB40ALP0C0E4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RAB40ALP0C0E4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAB40ALP0C0E4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB40ALP0C0E4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RAB40ALP0C0E4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.96■□□□□ 0.79
RAB40ALP0C0E4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB40ALP0C0E4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RAB40ALP0C0E4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.96■□□□□ 0.79
RAB40ALP0C0E4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.96■□□□□ 0.79
RAB40ALP0C0E4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.96■□□□□ 0.79
RAB40ALP0C0E4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.96■□□□□ 0.79
RAB40ALP0C0E4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.96■□□□□ 0.79
RAB40ALP0C0E4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
RAB40ALP0C0E4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB40ALP0C0E4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB40ALP0C0E4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB40ALP0C0E4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB40ALP0C0E4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms