Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.83■□□□□ 0.45
CD74P04233 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CD74P04233 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.83■□□□□ 0.45
CD74P04233 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CD74P04233 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CD74P04233 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.83■□□□□ 0.45
CD74P04233 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CD74P04233 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CD74P04233 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.83■□□□□ 0.45
CD74P04233 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.83■□□□□ 0.45
CD74P04233 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.83■□□□□ 0.44
CD74P04233 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.83■□□□□ 0.44
CD74P04233 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.83■□□□□ 0.44
CD74P04233 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.83■□□□□ 0.44
CD74P04233 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CD74P04233 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.83■□□□□ 0.44
CD74P04233 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.83■□□□□ 0.44
CD74P04233 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CD74P04233 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CD74P04233 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.83■□□□□ 0.44
CD74P04233 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CD74P04233 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CD74P04233 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
CD74P04233 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD74P04233 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.82■□□□□ 0.44
CD74P04233 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD74P04233 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD74P04233 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD74P04233 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CD74P04233 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CD74P04233 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD74P04233 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.82■□□□□ 0.44
CD74P04233 AC103834.1-201ENST00000520383 144 ntBASIC17.82■□□□□ 0.44
CD74P04233 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.82■□□□□ 0.44
CD74P04233 AC103724.3-201ENST00000564481 992 ntBASIC17.82■□□□□ 0.44
CD74P04233 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.82■□□□□ 0.44
CD74P04233 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD74P04233 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CD74P04233 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD74P04233 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.81■□□□□ 0.44
CD74P04233 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD74P04233 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.81■□□□□ 0.44
CD74P04233 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CD74P04233 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD74P04233 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD74P04233 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD74P04233 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD74P04233 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD74P04233 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.81■□□□□ 0.44
CD74P04233 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD74P04233 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD74P04233 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.81■□□□□ 0.44
CD74P04233 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CD74P04233 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD74P04233 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD74P04233 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.81■□□□□ 0.44
CD74P04233 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.81■□□□□ 0.44
CD74P04233 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD74P04233 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CD74P04233 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CD74P04233 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD74P04233 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD74P04233 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD74P04233 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD74P04233 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD74P04233 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.8■□□□□ 0.44
CD74P04233 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.8■□□□□ 0.44
CD74P04233 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD74P04233 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD74P04233 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CD74P04233 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD74P04233 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.79■□□□□ 0.44
CD74P04233 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.79■□□□□ 0.44
CD74P04233 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CD74P04233 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD74P04233 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD74P04233 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD74P04233 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD74P04233 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD74P04233 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.79■□□□□ 0.44
CD74P04233 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CD74P04233 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD74P04233 ABHD17AP5-201ENST00000580133 923 ntBASIC17.79■□□□□ 0.44
CD74P04233 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.79■□□□□ 0.44
CD74P04233 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD74P04233 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD74P04233 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.79■□□□□ 0.44
CD74P04233 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD74P04233 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD74P04233 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CD74P04233 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
CD74P04233 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD74P04233 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD74P04233 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.78■□□□□ 0.44
CD74P04233 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
CD74P04233 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.78■□□□□ 0.44
CD74P04233 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD74P04233 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD74P04233 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.78■□□□□ 0.44
CD74P04233 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms