Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TIMP1P01033 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
TIMP1P01033 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.25■■□□□ 1.31
TIMP1P01033 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TIMP1P01033 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
TIMP1P01033 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TIMP1P01033 AC243732.1-201ENST00000612648 864 ntBASIC23.24■■□□□ 1.31
TIMP1P01033 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TIMP1P01033 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TIMP1P01033 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.24■■□□□ 1.31
TIMP1P01033 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TIMP1P01033 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
TIMP1P01033 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TIMP1P01033 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.23■■□□□ 1.31
TIMP1P01033 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.23■■□□□ 1.31
TIMP1P01033 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.23■■□□□ 1.31
TIMP1P01033 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.23■■□□□ 1.31
TIMP1P01033 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
TIMP1P01033 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TIMP1P01033 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TIMP1P01033 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.23■■□□□ 1.31
TIMP1P01033 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
TIMP1P01033 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TIMP1P01033 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TIMP1P01033 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TIMP1P01033 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TIMP1P01033 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TIMP1P01033 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TIMP1P01033 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.22■■□□□ 1.31
TIMP1P01033 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.22■■□□□ 1.31
TIMP1P01033 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TIMP1P01033 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.22■■□□□ 1.31
TIMP1P01033 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
TIMP1P01033 AC008403.3-201ENST00000598924 454 ntBASIC23.22■■□□□ 1.31
TIMP1P01033 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.22■■□□□ 1.31
TIMP1P01033 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.22■■□□□ 1.31
TIMP1P01033 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TIMP1P01033 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TIMP1P01033 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TIMP1P01033 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.21■■□□□ 1.31
TIMP1P01033 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TIMP1P01033 MIR718-201ENST00000390190 70 ntBASIC23.21■■□□□ 1.31
TIMP1P01033 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.21■■□□□ 1.31
TIMP1P01033 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.21■■□□□ 1.31
TIMP1P01033 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.21■■□□□ 1.31
TIMP1P01033 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.21■■□□□ 1.31
TIMP1P01033 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.21■■□□□ 1.31
TIMP1P01033 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.21■■□□□ 1.31
TIMP1P01033 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.21■■□□□ 1.31
TIMP1P01033 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TIMP1P01033 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TIMP1P01033 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TIMP1P01033 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TIMP1P01033 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
TIMP1P01033 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.2■■□□□ 1.3
TIMP1P01033 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.2■■□□□ 1.3
TIMP1P01033 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.2■■□□□ 1.3
TIMP1P01033 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TIMP1P01033 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.2■■□□□ 1.3
TIMP1P01033 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
TIMP1P01033 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TIMP1P01033 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
TIMP1P01033 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.2■■□□□ 1.3
TIMP1P01033 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.2■■□□□ 1.3
TIMP1P01033 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TIMP1P01033 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.2■■□□□ 1.3
TIMP1P01033 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.2■■□□□ 1.3
TIMP1P01033 AC020928.2-201ENST00000588717 2197 ntBASIC23.2■■□□□ 1.3
TIMP1P01033 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
TIMP1P01033 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TIMP1P01033 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TIMP1P01033 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.19■■□□□ 1.3
TIMP1P01033 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TIMP1P01033 MIR4497-201ENST00000583208 89 ntBASIC23.19■■□□□ 1.3
TIMP1P01033 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TIMP1P01033 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TIMP1P01033 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TIMP1P01033 ANOS2P-203ENST00000472227 1816 ntBASIC23.18■■□□□ 1.3
TIMP1P01033 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TIMP1P01033 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.18■■□□□ 1.3
TIMP1P01033 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.18■■□□□ 1.3
TIMP1P01033 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.18■■□□□ 1.3
TIMP1P01033 AC073912.3-201ENST00000624414 853 ntBASIC23.18■■□□□ 1.3
TIMP1P01033 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TIMP1P01033 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.18■■□□□ 1.3
TIMP1P01033 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TIMP1P01033 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TIMP1P01033 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.17■■□□□ 1.3
TIMP1P01033 ECEL1P3-201ENST00000427961 737 ntBASIC23.17■■□□□ 1.3
TIMP1P01033 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
TIMP1P01033 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.17■■□□□ 1.3
TIMP1P01033 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.17■■□□□ 1.3
TIMP1P01033 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TIMP1P01033 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.16■■□□□ 1.3
TIMP1P01033 AC092068.2-201ENST00000590491 1708 ntBASIC23.16■■□□□ 1.3
TIMP1P01033 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
TIMP1P01033 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TIMP1P01033 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.16■■□□□ 1.3
TIMP1P01033 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TIMP1P01033 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms