Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DHFRP00374 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DHFRP00374 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.28■□□□□ 0.52
DHFRP00374 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
DHFRP00374 AC012354.3-201ENST00000623734 483 ntBASIC18.28■□□□□ 0.52
DHFRP00374 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
DHFRP00374 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.28■□□□□ 0.52
DHFRP00374 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.28■□□□□ 0.52
DHFRP00374 GABARAPL3-202ENST00000624044 1851 ntBASIC18.28■□□□□ 0.52
DHFRP00374 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DHFRP00374 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
DHFRP00374 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DHFRP00374 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DHFRP00374 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
DHFRP00374 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DHFRP00374 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.27■□□□□ 0.52
DHFRP00374 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DHFRP00374 AC004987.1-201ENST00000428627 508 ntBASIC18.27■□□□□ 0.52
DHFRP00374 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DHFRP00374 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
DHFRP00374 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DHFRP00374 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.27■□□□□ 0.51
DHFRP00374 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
DHFRP00374 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
DHFRP00374 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.27■□□□□ 0.51
DHFRP00374 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
DHFRP00374 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
DHFRP00374 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.27■□□□□ 0.51
DHFRP00374 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
DHFRP00374 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.26■□□□□ 0.51
DHFRP00374 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DHFRP00374 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DHFRP00374 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DHFRP00374 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DHFRP00374 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
DHFRP00374 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DHFRP00374 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DHFRP00374 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
DHFRP00374 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DHFRP00374 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.26■□□□□ 0.51
DHFRP00374 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
DHFRP00374 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DHFRP00374 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DHFRP00374 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DHFRP00374 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DHFRP00374 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DHFRP00374 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.26■□□□□ 0.51
DHFRP00374 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DHFRP00374 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
DHFRP00374 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DHFRP00374 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
DHFRP00374 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DHFRP00374 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
DHFRP00374 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DHFRP00374 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
DHFRP00374 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.25■□□□□ 0.51
DHFRP00374 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DHFRP00374 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
DHFRP00374 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.25■□□□□ 0.51
DHFRP00374 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DHFRP00374 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DHFRP00374 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.25■□□□□ 0.51
DHFRP00374 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.25■□□□□ 0.51
DHFRP00374 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DHFRP00374 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
DHFRP00374 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DHFRP00374 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DHFRP00374 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DHFRP00374 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DHFRP00374 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.24■□□□□ 0.51
DHFRP00374 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DHFRP00374 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.24■□□□□ 0.51
DHFRP00374 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DHFRP00374 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
DHFRP00374 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
DHFRP00374 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DHFRP00374 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.24■□□□□ 0.51
DHFRP00374 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DHFRP00374 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DHFRP00374 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.24■□□□□ 0.51
DHFRP00374 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.24■□□□□ 0.51
DHFRP00374 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
DHFRP00374 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
DHFRP00374 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.24■□□□□ 0.51
DHFRP00374 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DHFRP00374 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.24■□□□□ 0.51
DHFRP00374 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
DHFRP00374 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DHFRP00374 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DHFRP00374 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DHFRP00374 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DHFRP00374 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.23■□□□□ 0.51
DHFRP00374 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
DHFRP00374 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DHFRP00374 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DHFRP00374 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.23■□□□□ 0.51
DHFRP00374 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DHFRP00374 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DHFRP00374 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DHFRP00374 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms