Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF4O60810 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF4O60810 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
PRAMEF4O60810 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.46■□□□□ 0.87
PRAMEF4O60810 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
PRAMEF4O60810 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF4O60810 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PRAMEF4O60810 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF4O60810 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF4O60810 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF4O60810 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF4O60810 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF4O60810 IRS3P-201ENST00000223076 1006 ntBASIC20.45■□□□□ 0.86
PRAMEF4O60810 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.45■□□□□ 0.86
PRAMEF4O60810 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.45■□□□□ 0.86
PRAMEF4O60810 AL024507.2-201ENST00000606070 2574 ntBASIC20.45■□□□□ 0.86
PRAMEF4O60810 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF4O60810 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PRAMEF4O60810 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.45■□□□□ 0.86
PRAMEF4O60810 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
PRAMEF4O60810 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
PRAMEF4O60810 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF4O60810 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF4O60810 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF4O60810 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
PRAMEF4O60810 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
PRAMEF4O60810 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.44■□□□□ 0.86
PRAMEF4O60810 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF4O60810 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.44■□□□□ 0.86
PRAMEF4O60810 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF4O60810 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.44■□□□□ 0.86
PRAMEF4O60810 AL358852.1-201ENST00000623174 1268 ntBASIC20.44■□□□□ 0.86
PRAMEF4O60810 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF4O60810 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF4O60810 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
PRAMEF4O60810 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PRAMEF4O60810 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.44■□□□□ 0.86
PRAMEF4O60810 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF4O60810 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
PRAMEF4O60810 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEF4O60810 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.43■□□□□ 0.86
PRAMEF4O60810 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.43■□□□□ 0.86
PRAMEF4O60810 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEF4O60810 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PRAMEF4O60810 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PRAMEF4O60810 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEF4O60810 ZNRF2P3-201ENST00000424200 374 ntBASIC20.43■□□□□ 0.86
PRAMEF4O60810 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.43■□□□□ 0.86
PRAMEF4O60810 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.43■□□□□ 0.86
PRAMEF4O60810 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.43■□□□□ 0.86
PRAMEF4O60810 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.43■□□□□ 0.86
PRAMEF4O60810 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEF4O60810 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.43■□□□□ 0.86
PRAMEF4O60810 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEF4O60810 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF4O60810 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.42■□□□□ 0.86
PRAMEF4O60810 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF4O60810 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.42■□□□□ 0.86
PRAMEF4O60810 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PRAMEF4O60810 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
PRAMEF4O60810 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF4O60810 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF4O60810 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.42■□□□□ 0.86
PRAMEF4O60810 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF4O60810 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.42■□□□□ 0.86
PRAMEF4O60810 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF4O60810 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF4O60810 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF4O60810 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF4O60810 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.42■□□□□ 0.86
PRAMEF4O60810 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PRAMEF4O60810 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.41■□□□□ 0.86
PRAMEF4O60810 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF4O60810 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF4O60810 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.41■□□□□ 0.86
PRAMEF4O60810 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF4O60810 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.41■□□□□ 0.86
PRAMEF4O60810 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.41■□□□□ 0.86
PRAMEF4O60810 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PRAMEF4O60810 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.41■□□□□ 0.86
PRAMEF4O60810 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF4O60810 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF4O60810 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PRAMEF4O60810 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF4O60810 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.41■□□□□ 0.86
PRAMEF4O60810 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF4O60810 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF4O60810 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF4O60810 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF4O60810 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF4O60810 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.4■□□□□ 0.86
PRAMEF4O60810 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.4■□□□□ 0.86
PRAMEF4O60810 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF4O60810 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF4O60810 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF4O60810 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.4■□□□□ 0.86
PRAMEF4O60810 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF4O60810 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.4■□□□□ 0.86
PRAMEF4O60810 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.4■□□□□ 0.86
PRAMEF4O60810 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms