Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-8O15522 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NKX2-8O15522 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-8O15522 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.7■□□□□ 0.74
NKX2-8O15522 RBM17P2-201ENST00000616397 1405 ntBASIC19.69■□□□□ 0.74
NKX2-8O15522 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
NKX2-8O15522 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-8O15522 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-8O15522 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
NKX2-8O15522 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-8O15522 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
NKX2-8O15522 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.69■□□□□ 0.74
NKX2-8O15522 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.69■□□□□ 0.74
NKX2-8O15522 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-8O15522 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.69■□□□□ 0.74
NKX2-8O15522 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.69■□□□□ 0.74
NKX2-8O15522 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.69■□□□□ 0.74
NKX2-8O15522 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-8O15522 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NKX2-8O15522 AC137767.1-201ENST00000602918 1920 ntBASIC19.68■□□□□ 0.74
NKX2-8O15522 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-8O15522 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NKX2-8O15522 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-8O15522 GCSHP5-201ENST00000443090 522 ntBASIC19.68■□□□□ 0.74
NKX2-8O15522 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
NKX2-8O15522 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.68■□□□□ 0.74
NKX2-8O15522 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.68■□□□□ 0.74
NKX2-8O15522 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.68■□□□□ 0.74
NKX2-8O15522 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NKX2-8O15522 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.68■□□□□ 0.74
NKX2-8O15522 AC006058.3-201ENST00000606217 1069 ntBASIC19.68■□□□□ 0.74
NKX2-8O15522 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.68■□□□□ 0.74
NKX2-8O15522 AP006294.2-201ENST00000641667 209 ntBASIC19.68■□□□□ 0.74
NKX2-8O15522 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NKX2-8O15522 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.68■□□□□ 0.74
NKX2-8O15522 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.68■□□□□ 0.74
NKX2-8O15522 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-8O15522 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.68■□□□□ 0.74
NKX2-8O15522 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.67■□□□□ 0.74
NKX2-8O15522 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NKX2-8O15522 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NKX2-8O15522 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-8O15522 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.67■□□□□ 0.74
NKX2-8O15522 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NKX2-8O15522 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-8O15522 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-8O15522 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-8O15522 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-8O15522 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-8O15522 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.67■□□□□ 0.74
NKX2-8O15522 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.67■□□□□ 0.74
NKX2-8O15522 AL158047.1-201ENST00000445918 881 ntBASIC19.67■□□□□ 0.74
NKX2-8O15522 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.67■□□□□ 0.74
NKX2-8O15522 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.67■□□□□ 0.74
NKX2-8O15522 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.67■□□□□ 0.74
NKX2-8O15522 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-8O15522 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-8O15522 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.66■□□□□ 0.74
NKX2-8O15522 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.66■□□□□ 0.74
NKX2-8O15522 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-8O15522 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-8O15522 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NKX2-8O15522 KRT16P2-201ENST00000414673 1423 ntBASIC19.66■□□□□ 0.74
NKX2-8O15522 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
NKX2-8O15522 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-8O15522 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-8O15522 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-8O15522 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-8O15522 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.65■□□□□ 0.74
NKX2-8O15522 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NKX2-8O15522 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-8O15522 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-8O15522 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.65■□□□□ 0.74
NKX2-8O15522 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.65■□□□□ 0.74
NKX2-8O15522 AC128676.1-201ENST00000454392 318 ntBASIC19.65■□□□□ 0.74
NKX2-8O15522 AC142381.4-202ENST00000563973 229 ntBASIC19.65■□□□□ 0.74
NKX2-8O15522 AL162412.1-201ENST00000567129 965 ntBASIC19.65■□□□□ 0.74
NKX2-8O15522 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.65■□□□□ 0.74
NKX2-8O15522 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.65■□□□□ 0.74
NKX2-8O15522 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-8O15522 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.65■□□□□ 0.74
NKX2-8O15522 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.65■□□□□ 0.74
NKX2-8O15522 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-8O15522 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NKX2-8O15522 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NKX2-8O15522 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NKX2-8O15522 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NKX2-8O15522 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.64■□□□□ 0.73
NKX2-8O15522 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-8O15522 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-8O15522 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.64■□□□□ 0.73
NKX2-8O15522 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.64■□□□□ 0.73
NKX2-8O15522 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-8O15522 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.64■□□□□ 0.73
NKX2-8O15522 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.64■□□□□ 0.73
NKX2-8O15522 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-8O15522 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-8O15522 AC061975.6-201ENST00000579045 1553 ntBASIC19.64■□□□□ 0.73
NKX2-8O15522 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.64■□□□□ 0.73
NKX2-8O15522 AC087742.1-201ENST00000575880 1738 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms