Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LRRC53A6NM62 SMUG1P1-201ENST00000590640 811 ntBASIC22.86■■□□□ 1.25
LRRC53A6NM62 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
LRRC53A6NM62 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LRRC53A6NM62 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.86■■□□□ 1.25
LRRC53A6NM62 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LRRC53A6NM62 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.86■■□□□ 1.25
LRRC53A6NM62 AL049796.1-201ENST00000565336 1766 ntBASIC22.86■■□□□ 1.25
LRRC53A6NM62 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
LRRC53A6NM62 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LRRC53A6NM62 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
LRRC53A6NM62 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LRRC53A6NM62 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.85■■□□□ 1.25
LRRC53A6NM62 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
LRRC53A6NM62 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LRRC53A6NM62 UNC93B3-201ENST00000308076 687 ntBASIC22.85■■□□□ 1.25
LRRC53A6NM62 BX842568.3-201ENST00000418104 571 ntBASIC22.85■■□□□ 1.25
LRRC53A6NM62 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.85■■□□□ 1.25
LRRC53A6NM62 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LRRC53A6NM62 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
LRRC53A6NM62 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
LRRC53A6NM62 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LRRC53A6NM62 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.84■■□□□ 1.25
LRRC53A6NM62 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
LRRC53A6NM62 AC133561.4-201ENST00000566112 224 ntBASIC22.84■■□□□ 1.25
LRRC53A6NM62 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.84■■□□□ 1.25
LRRC53A6NM62 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.84■■□□□ 1.25
LRRC53A6NM62 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.84■■□□□ 1.25
LRRC53A6NM62 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
LRRC53A6NM62 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
LRRC53A6NM62 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
LRRC53A6NM62 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LRRC53A6NM62 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LRRC53A6NM62 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LRRC53A6NM62 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LRRC53A6NM62 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LRRC53A6NM62 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LRRC53A6NM62 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LRRC53A6NM62 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.84■■□□□ 1.25
LRRC53A6NM62 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
LRRC53A6NM62 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
LRRC53A6NM62 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
LRRC53A6NM62 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.83■■□□□ 1.25
LRRC53A6NM62 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
LRRC53A6NM62 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
LRRC53A6NM62 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.83■■□□□ 1.25
LRRC53A6NM62 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
LRRC53A6NM62 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.83■■□□□ 1.25
LRRC53A6NM62 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.83■■□□□ 1.25
LRRC53A6NM62 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.83■■□□□ 1.25
LRRC53A6NM62 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
LRRC53A6NM62 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
LRRC53A6NM62 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
LRRC53A6NM62 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.83■■□□□ 1.24
LRRC53A6NM62 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
LRRC53A6NM62 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
LRRC53A6NM62 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
LRRC53A6NM62 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LRRC53A6NM62 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
LRRC53A6NM62 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
LRRC53A6NM62 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LRRC53A6NM62 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LRRC53A6NM62 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LRRC53A6NM62 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
LRRC53A6NM62 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
LRRC53A6NM62 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LRRC53A6NM62 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LRRC53A6NM62 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.82■■□□□ 1.24
LRRC53A6NM62 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
LRRC53A6NM62 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
LRRC53A6NM62 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
LRRC53A6NM62 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.81■■□□□ 1.24
LRRC53A6NM62 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LRRC53A6NM62 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.81■■□□□ 1.24
LRRC53A6NM62 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
LRRC53A6NM62 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LRRC53A6NM62 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LRRC53A6NM62 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LRRC53A6NM62 AC024257.2-201ENST00000549699 147 ntBASIC22.81■■□□□ 1.24
LRRC53A6NM62 AC073130.3-201ENST00000624389 2278 ntBASIC22.81■■□□□ 1.24
LRRC53A6NM62 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
LRRC53A6NM62 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
LRRC53A6NM62 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LRRC53A6NM62 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.81■■□□□ 1.24
LRRC53A6NM62 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.81■■□□□ 1.24
LRRC53A6NM62 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
LRRC53A6NM62 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.8■■□□□ 1.24
LRRC53A6NM62 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
LRRC53A6NM62 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
LRRC53A6NM62 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
LRRC53A6NM62 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
LRRC53A6NM62 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.8■■□□□ 1.24
LRRC53A6NM62 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
LRRC53A6NM62 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
LRRC53A6NM62 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.8■■□□□ 1.24
LRRC53A6NM62 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.8■■□□□ 1.24
LRRC53A6NM62 AC233992.3-201ENST00000607491 485 ntBASIC22.8■■□□□ 1.24
LRRC53A6NM62 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
LRRC53A6NM62 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.8■■□□□ 1.24
LRRC53A6NM62 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms