Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV7-1A0A0A6YYK4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRBV7-1A0A0A6YYK4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV7-1A0A0A6YYK4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV7-1A0A0A6YYK4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.48■□□□□ 0.23
TRBV7-1A0A0A6YYK4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV7-1A0A0A6YYK4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.47■□□□□ 0.23
TRBV7-1A0A0A6YYK4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV7-1A0A0A6YYK4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV7-1A0A0A6YYK4 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.47■□□□□ 0.23
TRBV7-1A0A0A6YYK4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.47■□□□□ 0.23
TRBV7-1A0A0A6YYK4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.47■□□□□ 0.23
TRBV7-1A0A0A6YYK4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV7-1A0A0A6YYK4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV7-1A0A0A6YYK4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV7-1A0A0A6YYK4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV7-1A0A0A6YYK4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.47■□□□□ 0.23
TRBV7-1A0A0A6YYK4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV7-1A0A0A6YYK4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV7-1A0A0A6YYK4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRBV7-1A0A0A6YYK4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.46■□□□□ 0.23
TRBV7-1A0A0A6YYK4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.46■□□□□ 0.23
TRBV7-1A0A0A6YYK4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV7-1A0A0A6YYK4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV7-1A0A0A6YYK4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV7-1A0A0A6YYK4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.46■□□□□ 0.23
TRBV7-1A0A0A6YYK4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV7-1A0A0A6YYK4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV7-1A0A0A6YYK4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV7-1A0A0A6YYK4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV7-1A0A0A6YYK4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.46■□□□□ 0.23
TRBV7-1A0A0A6YYK4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.46■□□□□ 0.23
TRBV7-1A0A0A6YYK4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.46■□□□□ 0.23
TRBV7-1A0A0A6YYK4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV7-1A0A0A6YYK4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV7-1A0A0A6YYK4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV7-1A0A0A6YYK4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.46■□□□□ 0.23
TRBV7-1A0A0A6YYK4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRBV7-1A0A0A6YYK4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 AC027612.3-201ENST00000413684 1047 ntBASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 Z98882.1-201ENST00000622160 2253 ntBASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV7-1A0A0A6YYK4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 TPRG1LP1-201ENST00000598702 760 ntBASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV7-1A0A0A6YYK4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms