Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-8A0A0A6YYG3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC14.75□□□□□ -0.05
TRBV6-8A0A0A6YYG3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
TRBV6-8A0A0A6YYG3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-8A0A0A6YYG3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-8A0A0A6YYG3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-8A0A0A6YYG3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC14.74□□□□□ -0.05
TRBV6-8A0A0A6YYG3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-8A0A0A6YYG3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRBV6-8A0A0A6YYG3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-8A0A0A6YYG3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-8A0A0A6YYG3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-8A0A0A6YYG3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-8A0A0A6YYG3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.74□□□□□ -0.05
TRBV6-8A0A0A6YYG3 IGHV3-19-201ENST00000521488 291 ntBASIC14.74□□□□□ -0.05
TRBV6-8A0A0A6YYG3 AC133561.4-201ENST00000566112 224 ntBASIC14.74□□□□□ -0.05
TRBV6-8A0A0A6YYG3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC14.74□□□□□ -0.05
TRBV6-8A0A0A6YYG3 SMUG1P1-201ENST00000590640 811 ntBASIC14.74□□□□□ -0.05
TRBV6-8A0A0A6YYG3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-8A0A0A6YYG3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRBV6-8A0A0A6YYG3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-8A0A0A6YYG3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.74□□□□□ -0.05
TRBV6-8A0A0A6YYG3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.73□□□□□ -0.05
TRBV6-8A0A0A6YYG3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC14.73□□□□□ -0.05
TRBV6-8A0A0A6YYG3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-8A0A0A6YYG3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-8A0A0A6YYG3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-8A0A0A6YYG3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
TRBV6-8A0A0A6YYG3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC14.73□□□□□ -0.05
TRBV6-8A0A0A6YYG3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-8A0A0A6YYG3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-8A0A0A6YYG3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-8A0A0A6YYG3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-8A0A0A6YYG3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
TRBV6-8A0A0A6YYG3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-8A0A0A6YYG3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 AF106564.1-201ENST00000607058 2553 ntBASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 AC027682.1-201ENST00000562846 899 ntBASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 AC008764.7-201ENST00000593779 1081 ntBASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC14.71□□□□□ -0.05
TRBV6-8A0A0A6YYG3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRBV6-8A0A0A6YYG3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.71□□□□□ -0.06
TRBV6-8A0A0A6YYG3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRBV6-8A0A0A6YYG3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 AL024507.2-201ENST00000606070 2574 ntBASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 AC096631.2-201ENST00000436136 790 ntBASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 PBX2P1-201ENST00000493219 1291 ntBASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TRBV6-8A0A0A6YYG3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms