Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV30A0A087WSZ9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV30A0A087WSZ9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV30A0A087WSZ9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV30A0A087WSZ9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 SLC47A1P1-202ENST00000449666 945 ntBASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV30A0A087WSZ9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 AL391422.3-201ENST00000603791 2761 ntBASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV30A0A087WSZ9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRAV30A0A087WSZ9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV30A0A087WSZ9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV30A0A087WSZ9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRAV30A0A087WSZ9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV30A0A087WSZ9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV30A0A087WSZ9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV30A0A087WSZ9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV30A0A087WSZ9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV30A0A087WSZ9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV30A0A087WSZ9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV30A0A087WSZ9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
TRAV30A0A087WSZ9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRAV30A0A087WSZ9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV30A0A087WSZ9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRAV30A0A087WSZ9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV30A0A087WSZ9 AL137060.1-201ENST00000618151 2648 ntBASIC16.59■□□□□ 0.25
TRAV30A0A087WSZ9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRAV30A0A087WSZ9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV30A0A087WSZ9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV30A0A087WSZ9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV30A0A087WSZ9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV30A0A087WSZ9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV30A0A087WSZ9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.58■□□□□ 0.25
TRAV30A0A087WSZ9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
TRAV30A0A087WSZ9 AL136116.3-201ENST00000402907 1138 ntBASIC16.58■□□□□ 0.24
TRAV30A0A087WSZ9 BX842568.3-201ENST00000418104 571 ntBASIC16.58■□□□□ 0.24
TRAV30A0A087WSZ9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV30A0A087WSZ9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV30A0A087WSZ9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV30A0A087WSZ9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.58■□□□□ 0.24
TRAV30A0A087WSZ9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV30A0A087WSZ9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
TRAV30A0A087WSZ9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV30A0A087WSZ9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV30A0A087WSZ9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
TRAV30A0A087WSZ9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV30A0A087WSZ9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms