Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV9-1A0A075B6T8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV9-1A0A075B6T8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV9-1A0A075B6T8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC15.96■□□□□ 0.15
TRAV9-1A0A075B6T8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV9-1A0A075B6T8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV9-1A0A075B6T8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRAV9-1A0A075B6T8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV9-1A0A075B6T8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRAV9-1A0A075B6T8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV9-1A0A075B6T8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV9-1A0A075B6T8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV9-1A0A075B6T8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV9-1A0A075B6T8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV9-1A0A075B6T8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC15.95■□□□□ 0.14
TRAV9-1A0A075B6T8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV9-1A0A075B6T8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV9-1A0A075B6T8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV9-1A0A075B6T8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV9-1A0A075B6T8 AC007029.1-201ENST00000604183 313 ntBASIC15.95■□□□□ 0.14
TRAV9-1A0A075B6T8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV9-1A0A075B6T8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRAV9-1A0A075B6T8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV9-1A0A075B6T8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV9-1A0A075B6T8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV9-1A0A075B6T8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV9-1A0A075B6T8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV9-1A0A075B6T8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV9-1A0A075B6T8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV9-1A0A075B6T8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV9-1A0A075B6T8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV9-1A0A075B6T8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV9-1A0A075B6T8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV9-1A0A075B6T8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV9-1A0A075B6T8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV9-1A0A075B6T8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV9-1A0A075B6T8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TRAV9-1A0A075B6T8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV9-1A0A075B6T8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV9-1A0A075B6T8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV9-1A0A075B6T8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRAV9-1A0A075B6T8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV9-1A0A075B6T8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
TRAV9-1A0A075B6T8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV9-1A0A075B6T8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV9-1A0A075B6T8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV9-1A0A075B6T8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV9-1A0A075B6T8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV9-1A0A075B6T8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV9-1A0A075B6T8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV9-1A0A075B6T8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRAV9-1A0A075B6T8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV9-1A0A075B6T8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV9-1A0A075B6T8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV9-1A0A075B6T8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV9-1A0A075B6T8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
TRAV9-1A0A075B6T8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV9-1A0A075B6T8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV9-1A0A075B6T8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV9-1A0A075B6T8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV9-1A0A075B6T8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV9-1A0A075B6T8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV9-1A0A075B6T8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV9-1A0A075B6T8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV9-1A0A075B6T8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV9-1A0A075B6T8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV9-1A0A075B6T8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
TRAV9-1A0A075B6T8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV9-1A0A075B6T8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV9-1A0A075B6T8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV9-1A0A075B6T8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV9-1A0A075B6T8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV9-1A0A075B6T8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV9-1A0A075B6T8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRAV9-1A0A075B6T8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV9-1A0A075B6T8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV9-1A0A075B6T8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV9-1A0A075B6T8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms