Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 PCDHAC2-203ENST00000615316 3011 ntBASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV20-1A0A075B6N2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 AC005082.1-201ENST00000413042 2259 ntBASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 AC144652.1-201ENST00000609974 1624 ntBASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV20-1A0A075B6N2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV20-1A0A075B6N2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV20-1A0A075B6N2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRBV20-1A0A075B6N2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.15□□□□□ -0.14
TRBV20-1A0A075B6N2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV20-1A0A075B6N2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV20-1A0A075B6N2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV20-1A0A075B6N2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV20-1A0A075B6N2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV20-1A0A075B6N2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.15□□□□□ -0.14
TRBV20-1A0A075B6N2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV20-1A0A075B6N2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV20-1A0A075B6N2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV20-1A0A075B6N2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV20-1A0A075B6N2 AC020916.1-201ENST00000587762 1774 ntBASIC14.14□□□□□ -0.15
TRBV20-1A0A075B6N2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV20-1A0A075B6N2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
TRBV20-1A0A075B6N2 MIR6090-201ENST00000622481 60 ntBASIC14.14□□□□□ -0.15
TRBV20-1A0A075B6N2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms