Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PASK-202ENST00000358649 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 AKT3-204ENST00000366540 1575 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 Z93929.2-201ENST00000615011 2623 ntBASIC11.92□□□□□ -0.5
LMO3Q8TAP4 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 ZMIZ2-201ENST00000265346 3643 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 KIFAP3-201ENST00000361580 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 SCFD2-202ENST00000401642 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 NDRG2-210ENST00000397856 1309 ntTSL 5 BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 HNRNPKP3-203ENST00000534639 1321 ntBASIC11.92□□□□□ -0.5
LMO3Q8TAP4 REG4-202ENST00000354219 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 ASB9-209ENST00000546332 1947 ntTSL 2 BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 KIZ-210ENST00000619189 2130 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 PAX6-257ENST00000639409 2450 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 TMEM254-202ENST00000372274 481 ntTSL 2 BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 MBP-210ENST00000397869 884 ntTSL 4 BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 SWI5-203ENST00000418976 763 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 AC087163.1-201ENST00000430089 381 ntBASIC11.92□□□□□ -0.5
LMO3Q8TAP4 SOX5-204ENST00000441133 638 ntTSL 2 BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 AC108025.2-201ENST00000455579 1199 ntTSL 3 BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 RN7SL487P-201ENST00000468140 344 ntBASIC11.92□□□□□ -0.5
LMO3Q8TAP4 KLF3-AS1-205ENST00000507091 642 ntTSL 3 BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 ANP32C-201ENST00000512835 705 ntBASIC11.92□□□□□ -0.5
LMO3Q8TAP4 ADAMTS12-206ENST00000515401 1003 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 FTH1-203ENST00000529191 530 ntTSL 2 BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 MYL6B-210ENST00000552568 703 ntTSL 5 BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 SNRPCP18-201ENST00000560619 439 ntBASIC11.92□□□□□ -0.5
LMO3Q8TAP4 MBP-234ENST00000578193 578 ntTSL 5 BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 PHF5CP-201ENST00000591298 325 ntBASIC11.92□□□□□ -0.5
LMO3Q8TAP4 AC010636.1-201ENST00000598116 628 ntTSL 3 BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 AC090826.3-201ENST00000611178 834 ntBASIC11.92□□□□□ -0.5
LMO3Q8TAP4 FGFR2-223ENST00000611527 435 ntTSL 3 BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 Metazoa_SRP.154-201ENST00000615469 268 ntBASIC11.92□□□□□ -0.5
LMO3Q8TAP4 IGHV3-79-201ENST00000618968 341 ntBASIC11.92□□□□□ -0.5
LMO3Q8TAP4 SEPT2-201ENST00000360051 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 CTCFL-201ENST00000243914 3567 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 AP2A1-201ENST00000354293 3388 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 TMEM255A-204ENST00000440464 3172 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 TGFA-201ENST00000295400 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 TTLL5-202ENST00000298832 4683 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 TEX2-208ENST00000584379 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 ZPLD1-204ENST00000491959 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 PRIMA1-203ENST00000393143 3649 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 ADD1-206ENST00000398129 3787 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 MOG-218ENST00000376894 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LMO3Q8TAP4 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 BROX-207ENST00000537020 3670 ntTSL 2 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 ATP8B3-203ENST00000526092 2759 ntTSL 2 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 NEFM-201ENST00000221166 4020 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 POLR1E-201ENST00000377792 2229 ntTSL 2 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 RCHY1-201ENST00000324439 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 GGPS1-201ENST00000282841 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 ZNF2-201ENST00000611147 1465 ntTSL 2 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 AL645922.1-202ENST00000477310 3377 ntTSL 5 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 CTNNBL1-210ENST00000628103 1958 ntTSL 2 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 FRG1-201ENST00000226798 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 MLANA-202ENST00000381476 791 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 AIMP2-203ENST00000400479 1107 ntTSL 5 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 AC104772.2-201ENST00000412747 613 ntBASIC11.91□□□□□ -0.5
LMO3Q8TAP4 AP001625.3-201ENST00000416179 449 ntTSL 2 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 HM13-IT1-201ENST00000421894 356 ntTSL 3 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 AC092807.1-201ENST00000426794 255 ntTSL 3 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 DLEC1P1-201ENST00000427139 576 ntBASIC11.91□□□□□ -0.5
LMO3Q8TAP4 AC011890.1-201ENST00000427955 303 ntBASIC11.91□□□□□ -0.5
LMO3Q8TAP4 FARP1-AS1-201ENST00000432229 323 ntTSL 3 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 AL160270.1-201ENST00000439960 631 ntTSL 5 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 AC092669.1-202ENST00000449673 905 ntTSL 3 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 AL672043.1-201ENST00000506599 395 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 AC024581.1-201ENST00000514791 566 ntTSL 4 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 ENPP7P13-201ENST00000567922 259 ntBASIC11.91□□□□□ -0.5
LMO3Q8TAP4 RPAIN-214ENST00000574003 561 ntTSL 4 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 RN7SL336P-201ENST00000580171 297 ntBASIC11.91□□□□□ -0.5
LMO3Q8TAP4 MIR4537-201ENST00000581717 70 ntBASIC11.91□□□□□ -0.5
LMO3Q8TAP4 TSPAN16-204ENST00000590327 997 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 LINC01531-206ENST00000602653 892 ntTSL 5 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 AP003171.3-201ENST00000635432 706 ntTSL 3 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 LINC01907-201ENST00000415174 2609 ntTSL 2 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 LINC02172-201ENST00000507365 2264 ntTSL 4 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 LRRC41-207ENST00000617190 4128 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 DPP9-201ENST00000262960 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 IFNAR2-205ENST00000404220 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 CECR3-201ENST00000428828 1915 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 AL137145.1-201ENST00000391437 2447 ntBASIC11.91□□□□□ -0.5
LMO3Q8TAP4 PRR5L-201ENST00000378867 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 JAM2-201ENST00000312957 4209 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 SUPT5H-204ENST00000432763 3710 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 AMPD2-205ENST00000393688 3217 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 AC068491.4-201ENST00000622940 3380 ntBASIC11.91□□□□□ -0.5
LMO3Q8TAP4 PMEPA1-203ENST00000347215 4546 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 NCAM1-202ENST00000401611 2510 ntTSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms