Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.111e-6■□□□□ 9.7
DDX3XO00571 CDC7-205ENST00000497611 729 ntTSL 314.05□□□□□ -0.161e-6■□□□□ 9.7
DDX3XO00571 CCDC32-214ENST00000561011 1577 ntTSL 2 BASIC13.47□□□□□ -0.251e-6■□□□□ 9.7
DDX3XO00571 CCDC32-208ENST00000559153 1918 ntTSL 1 (best)13.4□□□□□ -0.261e-6■□□□□ 9.7
DDX3XO00571 EIF2S1-206ENST00000557310 999 ntTSL 213.34□□□□□ -0.271e-6■□□□□ 9.7
DDX3XO00571 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC12.92□□□□□ -0.341e-6■□□□□ 9.7
DDX3XO00571 CCDC32-204ENST00000558750 814 ntTSL 5 BASIC12.55□□□□□ -0.41e-6■□□□□ 9.7
DDX3XO00571 CCDC32-205ENST00000558871 1075 ntTSL 2 BASIC11.59□□□□□ -0.551e-6■□□□□ 9.7
DDX3XO00571 CCDC32-202ENST00000416810 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.631e-6■□□□□ 9.7
DDX3XO00571 CCDC32-207ENST00000559103 557 ntTSL 410.57□□□□□ -0.721e-6■□□□□ 9.7
DDX3XO00571 CCDC32-209ENST00000559291 6131 ntTSL 510.39□□□□□ -0.751e-6■□□□□ 9.7
DDX3XO00571 CCDC32-211ENST00000560109 343 ntTSL 59.97□□□□□ -0.811e-6■□□□□ 9.7
DDX3XO00571 TSEN15-204ENST00000457455 417 ntTSL 38.37□□□□□ -1.071e-6■□□□□ 9.7
DDX3XO00571 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC8.35□□□□□ -1.071e-6■□□□□ 9.7
DDX3XO00571 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC8.35□□□□□ -1.071e-6■□□□□ 9.7
DDX3XO00571 CCDC32-212ENST00000560305 557 ntTSL 4 BASIC8.35□□□□□ -1.071e-6■□□□□ 9.7
DDX3XO00571 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.241e-6■□□□□ 9.7
DDX3XO00571 ATP6V1E1-208ENST00000481365 692 ntTSL 47.22□□□□□ -1.251e-6■□□□□ 9.7
DDX3XO00571 PARPBP-208ENST00000535811 1465 ntTSL 26.42□□□□□ -1.384e-8■□□□□ 9.7
DDX3XO00571 CDC7-202ENST00000426137 701 ntTSL 56.07□□□□□ -1.441e-6■□□□□ 9.7
DDX3XO00571 ATP6V1E1-209ENST00000484653 747 ntTSL 56.04□□□□□ -1.441e-6■□□□□ 9.7
DDX3XO00571 CCDC32-206ENST00000558918 349 ntTSL 35.07□□□□□ -1.61e-6■□□□□ 9.7
DDX3XO00571 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.651e-6■□□□□ 9.7
DDX3XO00571 PARPBP-206ENST00000417507 2212 ntTSL 1 (best)3.71□□□□□ -1.824e-8■□□□□ 9.7
DDX3XO00571 PARPBP-205ENST00000412715 2133 ntTSL 1 (best)3.24□□□□□ -1.894e-8■□□□□ 9.7
DDX3XO00571 PARPBP-207ENST00000457614 2319 ntTSL 1 (best)2.47□□□□□ -2.014e-8■□□□□ 9.7
DDX3XO00571 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC27.95■■■□□ 2.073e-8■□□□□ 9.7
DDX3XO00571 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.013e-8■□□□□ 9.7
DDX3XO00571 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.27e-7■□□□□ 9.7
DDX3XO00571 PLEKHG6-207ENST00000538208 404 ntTSL 37.99□□□□□ -1.133e-8■□□□□ 9.7
DDX3XO00571 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 12e-26■□□□□ 9.7
DDX3XO00571 HDAC1-207ENST00000481281 721 ntTSL 513.39□□□□□ -0.272e-26■□□□□ 9.7
DDX3XO00571 HDAC1-203ENST00000463172 895 ntTSL 213.35□□□□□ -0.272e-26■□□□□ 9.7
DDX3XO00571 CD63-207ENST00000548898 727 ntTSL 2 BASIC12.12□□□□□ -0.472e-26■□□□□ 9.7
DDX3XO00571 CD63-212ENST00000552067 621 ntTSL 5 BASIC12.12□□□□□ -0.472e-26■□□□□ 9.7
DDX3XO00571 HDAC1-202ENST00000428704 664 ntTSL 29.11□□□□□ -0.952e-26■□□□□ 9.7
DDX3XO00571 CD63-206ENST00000548160 648 ntTSL 2 BASIC8.69□□□□□ -1.022e-26■□□□□ 9.7
DDX3XO00571 HDAC1-205ENST00000472928 532 ntTSL 26.71□□□□□ -1.342e-26■□□□□ 9.7
DDX3XO00571 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.08■■□□□ 1.136e-7■□□□□ 9.7
DDX3XO00571 RAB11A-206ENST00000567671 635 ntTSL 37.73□□□□□ -1.171e-15■□□□□ 9.7
DDX3XO00571 WFS1-201ENST00000226760 3640 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.312e-6■□□□□ 9.7
DDX3XO00571 WFS1-202ENST00000503569 3255 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.472e-6■□□□□ 9.7
DDX3XO00571 EGLN2-208ENST00000593972 935 ntTSL 225.49■■□□□ 1.672e-7■□□□□ 9.7
DDX3XO00571 EGLN2-210ENST00000594380 597 ntTSL 423.46■■□□□ 1.352e-7■□□□□ 9.7
DDX3XO00571 EGLN2-215ENST00000598654 590 ntTSL 323.04■■□□□ 1.287e-7■□□□□ 9.7
DDX3XO00571 EGLN2-206ENST00000593525 709 ntTSL 318.15■□□□□ 0.52e-7■□□□□ 9.7
DDX3XO00571 EGLN2-217ENST00000601733 584 ntTSL 417.53■□□□□ 0.42e-7■□□□□ 9.7
DDX3XO00571 CALCOCO2-209ENST00000507076 767 ntTSL 322.83■■□□□ 1.254e-15■□□□□ 9.7
DDX3XO00571 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.585e-8■□□□□ 9.7
DDX3XO00571 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.285e-8■□□□□ 9.7
DDX3XO00571 ARHGEF2-216ENST00000495070 571 ntTSL 416.32■□□□□ 0.28e-8■□□□□ 9.7
DDX3XO00571 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.86■□□□□ 0.135e-8■□□□□ 9.7
DDX3XO00571 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.027e-12■□□□□ 9.7
DDX3XO00571 C19orf48-203ENST00000593287 578 ntTSL 514.52□□□□□ -0.093e-7■□□□□ 9.7
DDX3XO00571 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.095e-8■□□□□ 9.7
DDX3XO00571 STON2-204ENST00000555226 1606 ntTSL 1 (best)14.33□□□□□ -0.124e-7■□□□□ 9.7
DDX3XO00571 TM9SF4-204ENST00000442842 563 ntTSL 414.3□□□□□ -0.125e-8■□□□□ 9.7
DDX3XO00571 PSMD9-203ENST00000535293 1773 ntTSL 314.26□□□□□ -0.135e-8■□□□□ 9.7
DDX3XO00571 ARHGEF2-213ENST00000476273 668 ntTSL 314.07□□□□□ -0.168e-8■□□□□ 9.7
DDX3XO00571 C12orf65-207ENST00000543139 3733 ntAPPRIS ALT2 TSL 213.98□□□□□ -0.175e-8■□□□□ 9.7
DDX3XO00571 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC13.65□□□□□ -0.228e-8■□□□□ 9.7
DDX3XO00571 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.268e-8■□□□□ 9.7
DDX3XO00571 TM9SF4-201ENST00000217315 4032 ntTSL 2 BASIC13.24□□□□□ -0.295e-8■□□□□ 9.7
DDX3XO00571 C19orf48-209ENST00000597705 892 ntTSL 312.97□□□□□ -0.333e-7■□□□□ 9.7
DDX3XO00571 C19orf48-208ENST00000597493 971 ntTSL 212.75□□□□□ -0.373e-7■□□□□ 9.7
DDX3XO00571 ARHGEF2-207ENST00000465079 693 ntTSL 212.12□□□□□ -0.478e-8■□□□□ 9.7
DDX3XO00571 ARHGEF2-211ENST00000471589 892 ntTSL 512.07□□□□□ -0.488e-8■□□□□ 9.7
DDX3XO00571 SCAMP3-203ENST00000462151 819 ntTSL 511.97□□□□□ -0.495e-8■□□□□ 9.7
DDX3XO00571 TM9SF4-203ENST00000417389 553 ntTSL 411.4□□□□□ -0.585e-8■□□□□ 9.7
DDX3XO00571 ZNF700-203ENST00000622593 2901 ntAPPRIS ALT2 TSL 4 BASIC11.39□□□□□ -0.595e-8■□□□□ 9.7
DDX3XO00571 ZNF700-201ENST00000254321 2882 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.65e-8■□□□□ 9.7
DDX3XO00571 NKIRAS2-203ENST00000393879 4213 ntTSL 1 (best)10.61□□□□□ -0.715e-8■□□□□ 9.7
DDX3XO00571 CALCOCO2-205ENST00000502761 724 ntTSL 210.13□□□□□ -0.794e-15■□□□□ 9.7
DDX3XO00571 STON2-201ENST00000267540 2977 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.924e-7■□□□□ 9.7
DDX3XO00571 AC008770.3-203ENST00000591441 677 ntTSL 38.9□□□□□ -0.985e-8■□□□□ 9.7
DDX3XO00571 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.994e-7■□□□□ 9.7
DDX3XO00571 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.345e-8■□□□□ 9.7
DDX3XO00571 ARHGEF2-214ENST00000477754 883 ntTSL 56.54□□□□□ -1.368e-8■□□□□ 9.7
DDX3XO00571 TM9SF4-205ENST00000450829 550 ntTSL 46.22□□□□□ -1.415e-8■□□□□ 9.7
DDX3XO00571 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.832e-8■□□□□ 9.7
DDX3XO00571 EBP-203ENST00000446158 714 ntTSL 516.48■□□□□ 0.231e-6■□□□□ 9.7
DDX3XO00571 EBP-201ENST00000276096 904 ntTSL 215.85■□□□□ 0.131e-6■□□□□ 9.7
DDX3XO00571 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.111e-6■□□□□ 9.7
DDX3XO00571 EBP-206ENST00000498425 796 ntTSL 314.94□□□□□ -0.021e-6■□□□□ 9.7
DDX3XO00571 EBP-202ENST00000414061 609 ntTSL 314.26□□□□□ -0.131e-6■□□□□ 9.7
DDX3XO00571 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC14.28□□□□□ -0.123e-21■□□□□ 9.7
DDX3XO00571 LGR5-203ENST00000540815 2800 ntTSL 1 (best) BASIC12.27□□□□□ -0.443e-21■□□□□ 9.7
DDX3XO00571 PPIF-202ENST00000448165 821 ntTSL 215.63■□□□□ 0.098e-23■□□□□ 9.7
DDX3XO00571 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC13.99□□□□□ -0.172e-13■□□□□ 9.6
DDX3XO00571 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC13.39□□□□□ -0.271e-15■□□□□ 9.6
DDX3XO00571 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.331e-15■□□□□ 9.6
DDX3XO00571 DUSP16-202ENST00000298573 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.612e-13■□□□□ 9.6
DDX3XO00571 SRC-211ENST00000497734 446 ntTSL 1 (best)13.71□□□□□ -0.214e-8■□□□□ 9.6
DDX3XO00571 MT-TH-201ENST00000387441 69 ntBASIC5.99□□□□□ -1.451e-323■□□□□ 9.6
DDX3XO00571 NAP1L4-218ENST00000530064 625 ntTSL 57.83□□□□□ -1.166e-8■□□□□ 9.6
DDX3XO00571 NAP1L4-205ENST00000455338 352 ntTSL 53.52□□□□□ -1.856e-8■□□□□ 9.6
DDX3XO00571 PSMD4-204ENST00000437736 787 ntTSL 510.56□□□□□ -0.721e-17■□□□□ 9.6
DDX3XO00571 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.455e-15■□□□□ 9.6
DDX3XO00571 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.921e-10■□□□□ 9.6
DDX3XO00571 MED10-203ENST00000504058 648 ntTSL 219.32■□□□□ 0.681e-10■□□□□ 9.6
Retrieved 100 of 47,714 protein–RNA pairs in 1440.1 ms