Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDHGB1Q9Y5G3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB1Q9Y5G3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHGB1Q9Y5G3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB1Q9Y5G3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB1Q9Y5G3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB1Q9Y5G3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB1Q9Y5G3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB1Q9Y5G3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGB1Q9Y5G3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB1Q9Y5G3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGB1Q9Y5G3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB1Q9Y5G3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB1Q9Y5G3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB1Q9Y5G3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB1Q9Y5G3 AC103724.3-201ENST00000564481 992 ntBASIC19.42■□□□□ 0.7
PCDHGB1Q9Y5G3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGB1Q9Y5G3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB1Q9Y5G3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGB1Q9Y5G3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PCDHGB1Q9Y5G3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB1Q9Y5G3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGB1Q9Y5G3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB1Q9Y5G3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGB1Q9Y5G3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB1Q9Y5G3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDHGB1Q9Y5G3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCDHGB1Q9Y5G3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB1Q9Y5G3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB1Q9Y5G3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB1Q9Y5G3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB1Q9Y5G3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB1Q9Y5G3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PCDHGB1Q9Y5G3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB1Q9Y5G3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB1Q9Y5G3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB1Q9Y5G3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
PCDHGB1Q9Y5G3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.41■□□□□ 0.7
PCDHGB1Q9Y5G3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PCDHGB1Q9Y5G3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGB1Q9Y5G3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCDHGB1Q9Y5G3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
PCDHGB1Q9Y5G3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGB1Q9Y5G3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGB1Q9Y5G3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB1Q9Y5G3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB1Q9Y5G3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGB1Q9Y5G3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.39■□□□□ 0.7
PCDHGB1Q9Y5G3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGB1Q9Y5G3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGB1Q9Y5G3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
PCDHGB1Q9Y5G3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB1Q9Y5G3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB1Q9Y5G3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB1Q9Y5G3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB1Q9Y5G3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDHGB1Q9Y5G3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.39■□□□□ 0.69
PCDHGB1Q9Y5G3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDHGB1Q9Y5G3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PCDHGB1Q9Y5G3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PCDHGB1Q9Y5G3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB1Q9Y5G3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHGB1Q9Y5G3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PCDHGB1Q9Y5G3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB1Q9Y5G3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB1Q9Y5G3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PCDHGB1Q9Y5G3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGB1Q9Y5G3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB1Q9Y5G3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PCDHGB1Q9Y5G3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB1Q9Y5G3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGB1Q9Y5G3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB1Q9Y5G3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB1Q9Y5G3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB1Q9Y5G3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB1Q9Y5G3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB1Q9Y5G3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB1Q9Y5G3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms