Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.84■□□□□ 0.93
PCDHB11Q9Y5F2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB11Q9Y5F2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB11Q9Y5F2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHB11Q9Y5F2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PCDHB11Q9Y5F2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PCDHB11Q9Y5F2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHB11Q9Y5F2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHB11Q9Y5F2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB11Q9Y5F2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB11Q9Y5F2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB11Q9Y5F2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDHB11Q9Y5F2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB11Q9Y5F2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHB11Q9Y5F2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
PCDHB11Q9Y5F2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB11Q9Y5F2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDHB11Q9Y5F2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHB11Q9Y5F2 TPRG1LP1-201ENST00000598702 760 ntBASIC20.83■□□□□ 0.93
PCDHB11Q9Y5F2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDHB11Q9Y5F2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB11Q9Y5F2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB11Q9Y5F2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PCDHB11Q9Y5F2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB11Q9Y5F2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB11Q9Y5F2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB11Q9Y5F2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB11Q9Y5F2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB11Q9Y5F2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB11Q9Y5F2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB11Q9Y5F2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHB11Q9Y5F2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHB11Q9Y5F2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHB11Q9Y5F2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHB11Q9Y5F2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB11Q9Y5F2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PCDHB11Q9Y5F2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB11Q9Y5F2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHB11Q9Y5F2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB11Q9Y5F2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB11Q9Y5F2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB11Q9Y5F2 C11orf96-202ENST00000528572 1834 ntBASIC20.81■□□□□ 0.92
PCDHB11Q9Y5F2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB11Q9Y5F2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB11Q9Y5F2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHB11Q9Y5F2 AL034346.1-201ENST00000568244 1277 ntBASIC20.81■□□□□ 0.92
PCDHB11Q9Y5F2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHB11Q9Y5F2 BID-214ENST00000617586 542 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHB11Q9Y5F2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHB11Q9Y5F2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB11Q9Y5F2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB11Q9Y5F2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB11Q9Y5F2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB11Q9Y5F2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHB11Q9Y5F2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
PCDHB11Q9Y5F2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 AP004607.7-201ENST00000527152 1677 ntBASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB11Q9Y5F2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PCDHB11Q9Y5F2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHB11Q9Y5F2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB11Q9Y5F2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PCDHB11Q9Y5F2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB11Q9Y5F2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PCDHB11Q9Y5F2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PCDHB11Q9Y5F2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB11Q9Y5F2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHB11Q9Y5F2 KRT19P1-201ENST00000405746 1186 ntBASIC20.79■□□□□ 0.92
PCDHB11Q9Y5F2 AC026185.1-201ENST00000445748 174 ntBASIC20.79■□□□□ 0.92
PCDHB11Q9Y5F2 AC073111.5-205ENST00000641717 521 ntBASIC20.79■□□□□ 0.92
PCDHB11Q9Y5F2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
PCDHB11Q9Y5F2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB11Q9Y5F2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB11Q9Y5F2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB11Q9Y5F2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB11Q9Y5F2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms