Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH1Q9Y2L9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH1Q9Y2L9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.17■□□□□ 0.82
LRCH1Q9Y2L9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH1Q9Y2L9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH1Q9Y2L9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH1Q9Y2L9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.17■□□□□ 0.82
LRCH1Q9Y2L9 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.17■□□□□ 0.82
LRCH1Q9Y2L9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH1Q9Y2L9 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.17■□□□□ 0.82
LRCH1Q9Y2L9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH1Q9Y2L9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH1Q9Y2L9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.17■□□□□ 0.82
LRCH1Q9Y2L9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH1Q9Y2L9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH1Q9Y2L9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH1Q9Y2L9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRCH1Q9Y2L9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRCH1Q9Y2L9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
LRCH1Q9Y2L9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRCH1Q9Y2L9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRCH1Q9Y2L9 SPCS2P3-201ENST00000500401 656 ntBASIC20.16■□□□□ 0.82
LRCH1Q9Y2L9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRCH1Q9Y2L9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.16■□□□□ 0.82
LRCH1Q9Y2L9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.16■□□□□ 0.82
LRCH1Q9Y2L9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRCH1Q9Y2L9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRCH1Q9Y2L9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.16■□□□□ 0.82
LRCH1Q9Y2L9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH1Q9Y2L9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LRCH1Q9Y2L9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LRCH1Q9Y2L9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.14■□□□□ 0.82
LRCH1Q9Y2L9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH1Q9Y2L9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH1Q9Y2L9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH1Q9Y2L9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH1Q9Y2L9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.14■□□□□ 0.81
LRCH1Q9Y2L9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH1Q9Y2L9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.14■□□□□ 0.81
LRCH1Q9Y2L9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH1Q9Y2L9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH1Q9Y2L9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH1Q9Y2L9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH1Q9Y2L9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LRCH1Q9Y2L9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LRCH1Q9Y2L9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LRCH1Q9Y2L9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LRCH1Q9Y2L9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LRCH1Q9Y2L9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH1Q9Y2L9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH1Q9Y2L9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH1Q9Y2L9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LRCH1Q9Y2L9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.13■□□□□ 0.81
LRCH1Q9Y2L9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH1Q9Y2L9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH1Q9Y2L9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.13■□□□□ 0.81
LRCH1Q9Y2L9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH1Q9Y2L9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH1Q9Y2L9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH1Q9Y2L9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH1Q9Y2L9 AC073314.1-201ENST00000568729 2216 ntBASIC20.12■□□□□ 0.81
LRCH1Q9Y2L9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH1Q9Y2L9 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.12■□□□□ 0.81
LRCH1Q9Y2L9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LRCH1Q9Y2L9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH1Q9Y2L9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LRCH1Q9Y2L9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH1Q9Y2L9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
LRCH1Q9Y2L9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH1Q9Y2L9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH1Q9Y2L9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.12■□□□□ 0.81
LRCH1Q9Y2L9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH1Q9Y2L9 AC139795.1-202ENST00000500444 432 ntBASIC20.12■□□□□ 0.81
LRCH1Q9Y2L9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.12■□□□□ 0.81
LRCH1Q9Y2L9 AC074183.2-201ENST00000623112 922 ntBASIC20.12■□□□□ 0.81
LRCH1Q9Y2L9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.12■□□□□ 0.81
LRCH1Q9Y2L9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH1Q9Y2L9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH1Q9Y2L9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms