Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.33■■□□□ 1.01
NCKAP1Q9Y2A7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.33■■□□□ 1.01
NCKAP1Q9Y2A7 SLC29A4P1-201ENST00000398760 971 ntBASIC21.33■■□□□ 1.01
NCKAP1Q9Y2A7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.33■■□□□ 1.01
NCKAP1Q9Y2A7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.33■■□□□ 1.01
NCKAP1Q9Y2A7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NCKAP1Q9Y2A7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.33■■□□□ 1.01
NCKAP1Q9Y2A7 AL050303.2-201ENST00000619798 666 ntBASIC21.33■■□□□ 1.01
NCKAP1Q9Y2A7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.33■■□□□ 1.01
NCKAP1Q9Y2A7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NCKAP1Q9Y2A7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NCKAP1Q9Y2A7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.33■■□□□ 1
NCKAP1Q9Y2A7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.32■■□□□ 1
NCKAP1Q9Y2A7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NCKAP1Q9Y2A7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NCKAP1Q9Y2A7 AC139530.1-201ENST00000575312 1977 ntBASIC21.32■■□□□ 1
NCKAP1Q9Y2A7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.32■■□□□ 1
NCKAP1Q9Y2A7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.32■■□□□ 1
NCKAP1Q9Y2A7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
NCKAP1Q9Y2A7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
NCKAP1Q9Y2A7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.32■■□□□ 1
NCKAP1Q9Y2A7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.32■■□□□ 1
NCKAP1Q9Y2A7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
NCKAP1Q9Y2A7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
NCKAP1Q9Y2A7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.32■■□□□ 1
NCKAP1Q9Y2A7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.32■■□□□ 1
NCKAP1Q9Y2A7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
NCKAP1Q9Y2A7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
NCKAP1Q9Y2A7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.31■■□□□ 1
NCKAP1Q9Y2A7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
NCKAP1Q9Y2A7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
NCKAP1Q9Y2A7 TERF1P5-201ENST00000477545 1207 ntBASIC21.31■■□□□ 1
NCKAP1Q9Y2A7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.31■■□□□ 1
NCKAP1Q9Y2A7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
NCKAP1Q9Y2A7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.31■■□□□ 1
NCKAP1Q9Y2A7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NCKAP1Q9Y2A7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.31■■□□□ 1
NCKAP1Q9Y2A7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.31■■□□□ 1
NCKAP1Q9Y2A7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.31■■□□□ 1
NCKAP1Q9Y2A7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.31■■□□□ 1
NCKAP1Q9Y2A7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.31■■□□□ 1
NCKAP1Q9Y2A7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
NCKAP1Q9Y2A7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NCKAP1Q9Y2A7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.3■■□□□ 1
NCKAP1Q9Y2A7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NCKAP1Q9Y2A7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NCKAP1Q9Y2A7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
NCKAP1Q9Y2A7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NCKAP1Q9Y2A7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
NCKAP1Q9Y2A7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.3■■□□□ 1
NCKAP1Q9Y2A7 TSPY6P-201ENST00000448518 926 ntBASIC21.3■■□□□ 1
NCKAP1Q9Y2A7 SLC7A5P2-201ENST00000553010 536 ntBASIC21.3■■□□□ 1
NCKAP1Q9Y2A7 AC013268.1-206ENST00000638368 961 ntBASIC21.3■■□□□ 1
NCKAP1Q9Y2A7 AC112229.1-201ENST00000639295 961 ntBASIC21.3■■□□□ 1
NCKAP1Q9Y2A7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.3■■□□□ 1
NCKAP1Q9Y2A7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.3■■□□□ 1
NCKAP1Q9Y2A7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NCKAP1Q9Y2A7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NCKAP1Q9Y2A7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.3■■□□□ 1
NCKAP1Q9Y2A7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.3■■□□□ 1
NCKAP1Q9Y2A7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NCKAP1Q9Y2A7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.3■■□□□ 1
NCKAP1Q9Y2A7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.29■■□□□ 1
NCKAP1Q9Y2A7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NCKAP1Q9Y2A7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.29■■□□□ 1
NCKAP1Q9Y2A7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.29■■□□□ 1
NCKAP1Q9Y2A7 POU5F1P4-201ENST00000413175 1085 ntBASIC21.29■■□□□ 1
NCKAP1Q9Y2A7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
NCKAP1Q9Y2A7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
NCKAP1Q9Y2A7 CNN2P6-201ENST00000439038 900 ntBASIC21.29■■□□□ 1
NCKAP1Q9Y2A7 AF201337.1-201ENST00000520239 748 ntBASIC21.29■■□□□ 1
NCKAP1Q9Y2A7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.29■■□□□ 1
NCKAP1Q9Y2A7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.29■■□□□ 1
NCKAP1Q9Y2A7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NCKAP1Q9Y2A7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NCKAP1Q9Y2A7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.28■■□□□ 1
NCKAP1Q9Y2A7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NCKAP1Q9Y2A7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NCKAP1Q9Y2A7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NCKAP1Q9Y2A7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.28■■□□□ 1
NCKAP1Q9Y2A7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NCKAP1Q9Y2A7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.28■■□□□ 1
NCKAP1Q9Y2A7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.28■■□□□ 1
NCKAP1Q9Y2A7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
NCKAP1Q9Y2A7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.28■■□□□ 1
NCKAP1Q9Y2A7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NCKAP1Q9Y2A7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
NCKAP1Q9Y2A7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NCKAP1Q9Y2A7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.27■■□□□ 1
NCKAP1Q9Y2A7 AC133561.1-201ENST00000568600 2415 ntBASIC21.27■■□□□ 1
NCKAP1Q9Y2A7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NCKAP1Q9Y2A7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.27■■□□□ 1
NCKAP1Q9Y2A7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
NCKAP1Q9Y2A7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.27■■□□□ 1
NCKAP1Q9Y2A7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NCKAP1Q9Y2A7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.27■■□□□ 1
NCKAP1Q9Y2A7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.27■■□□□ 1
NCKAP1Q9Y2A7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.27■■□□□ 1
NCKAP1Q9Y2A7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.27■■□□□ 1
NCKAP1Q9Y2A7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms