Protein–RNA interactions for Protein: Q9UNH7

SNX6, Sorting nexin-6, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6Q9UNH7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNX6Q9UNH7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.56■□□□□ 0.88
SNX6Q9UNH7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX6Q9UNH7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX6Q9UNH7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.55■□□□□ 0.88
SNX6Q9UNH7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.55■□□□□ 0.88
SNX6Q9UNH7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
SNX6Q9UNH7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNX6Q9UNH7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX6Q9UNH7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.55■□□□□ 0.88
SNX6Q9UNH7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.55■□□□□ 0.88
SNX6Q9UNH7 IGHV3-19-201ENST00000521488 291 ntBASIC20.55■□□□□ 0.88
SNX6Q9UNH7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.55■□□□□ 0.88
SNX6Q9UNH7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.55■□□□□ 0.88
SNX6Q9UNH7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.55■□□□□ 0.88
SNX6Q9UNH7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.55■□□□□ 0.88
SNX6Q9UNH7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.55■□□□□ 0.88
SNX6Q9UNH7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNX6Q9UNH7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX6Q9UNH7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.55■□□□□ 0.88
SNX6Q9UNH7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX6Q9UNH7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX6Q9UNH7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNX6Q9UNH7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX6Q9UNH7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SNX6Q9UNH7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX6Q9UNH7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX6Q9UNH7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX6Q9UNH7 AC096631.2-201ENST00000436136 790 ntBASIC20.54■□□□□ 0.88
SNX6Q9UNH7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX6Q9UNH7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX6Q9UNH7 PBX2P1-201ENST00000493219 1291 ntBASIC20.54■□□□□ 0.88
SNX6Q9UNH7 SMUG1P1-201ENST00000590640 811 ntBASIC20.54■□□□□ 0.88
SNX6Q9UNH7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX6Q9UNH7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX6Q9UNH7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX6Q9UNH7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX6Q9UNH7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX6Q9UNH7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX6Q9UNH7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX6Q9UNH7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.53■□□□□ 0.88
SNX6Q9UNH7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SNX6Q9UNH7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX6Q9UNH7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX6Q9UNH7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.53■□□□□ 0.88
SNX6Q9UNH7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.53■□□□□ 0.88
SNX6Q9UNH7 AC008764.7-201ENST00000593779 1081 ntBASIC20.53■□□□□ 0.88
SNX6Q9UNH7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNX6Q9UNH7 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.53■□□□□ 0.88
SNX6Q9UNH7 AC003102.1-202ENST00000563394 1796 ntBASIC20.53■□□□□ 0.88
SNX6Q9UNH7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX6Q9UNH7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX6Q9UNH7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SNX6Q9UNH7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SNX6Q9UNH7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX6Q9UNH7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SNX6Q9UNH7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.52■□□□□ 0.88
SNX6Q9UNH7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX6Q9UNH7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX6Q9UNH7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.52■□□□□ 0.88
SNX6Q9UNH7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.52■□□□□ 0.88
SNX6Q9UNH7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNX6Q9UNH7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SNX6Q9UNH7 AC027682.1-201ENST00000562846 899 ntBASIC20.52■□□□□ 0.88
SNX6Q9UNH7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.52■□□□□ 0.88
SNX6Q9UNH7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.52■□□□□ 0.88
SNX6Q9UNH7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.52■□□□□ 0.88
SNX6Q9UNH7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SNX6Q9UNH7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SNX6Q9UNH7 AP006587.3-201ENST00000525742 1516 ntBASIC20.52■□□□□ 0.87
SNX6Q9UNH7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SNX6Q9UNH7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SNX6Q9UNH7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX6Q9UNH7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SNX6Q9UNH7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.51■□□□□ 0.87
SNX6Q9UNH7 AC106739.1-201ENST00000617035 715 ntBASIC20.51■□□□□ 0.87
SNX6Q9UNH7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX6Q9UNH7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.51■□□□□ 0.87
SNX6Q9UNH7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX6Q9UNH7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
SNX6Q9UNH7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SNX6Q9UNH7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX6Q9UNH7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX6Q9UNH7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX6Q9UNH7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX6Q9UNH7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.5■□□□□ 0.87
SNX6Q9UNH7 AC099791.1-201ENST00000416440 715 ntBASIC20.5■□□□□ 0.87
SNX6Q9UNH7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.5■□□□□ 0.87
SNX6Q9UNH7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SNX6Q9UNH7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.5■□□□□ 0.87
SNX6Q9UNH7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SNX6Q9UNH7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.5■□□□□ 0.87
SNX6Q9UNH7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX6Q9UNH7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX6Q9UNH7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SNX6Q9UNH7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.49■□□□□ 0.87
SNX6Q9UNH7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX6Q9UNH7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX6Q9UNH7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.49■□□□□ 0.87
SNX6Q9UNH7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms