Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PCDHGB4Q9UN71 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHGB4Q9UN71 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB4Q9UN71 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB4Q9UN71 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB4Q9UN71 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB4Q9UN71 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGB4Q9UN71 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PCDHGB4Q9UN71 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGB4Q9UN71 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDHGB4Q9UN71 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGB4Q9UN71 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
PCDHGB4Q9UN71 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGB4Q9UN71 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGB4Q9UN71 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGB4Q9UN71 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGB4Q9UN71 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
PCDHGB4Q9UN71 SRD5A1P1-201ENST00000442297 786 ntBASIC20.5■□□□□ 0.87
PCDHGB4Q9UN71 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHGB4Q9UN71 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PCDHGB4Q9UN71 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGB4Q9UN71 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHGB4Q9UN71 AC007952.6-201ENST00000573168 2673 ntBASIC20.5■□□□□ 0.87
PCDHGB4Q9UN71 AC003957.1-201ENST00000625108 2673 ntBASIC20.5■□□□□ 0.87
PCDHGB4Q9UN71 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PCDHGB4Q9UN71 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGB4Q9UN71 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHGB4Q9UN71 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB4Q9UN71 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB4Q9UN71 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB4Q9UN71 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGB4Q9UN71 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB4Q9UN71 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PCDHGB4Q9UN71 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHGB4Q9UN71 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.49■□□□□ 0.87
PCDHGB4Q9UN71 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB4Q9UN71 AC006455.2-201ENST00000429931 906 ntBASIC20.49■□□□□ 0.87
PCDHGB4Q9UN71 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB4Q9UN71 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB4Q9UN71 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.49■□□□□ 0.87
PCDHGB4Q9UN71 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGB4Q9UN71 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB4Q9UN71 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PCDHGB4Q9UN71 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB4Q9UN71 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB4Q9UN71 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGB4Q9UN71 AF106564.1-201ENST00000607058 2553 ntBASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 AC068587.7-201ENST00000641602 218 ntBASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGB4Q9UN71 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB4Q9UN71 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB4Q9UN71 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB4Q9UN71 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PCDHGB4Q9UN71 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB4Q9UN71 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDHGB4Q9UN71 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDHGB4Q9UN71 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PCDHGB4Q9UN71 AL031602.1-201ENST00000633169 911 ntBASIC20.47■□□□□ 0.87
PCDHGB4Q9UN71 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGB4Q9UN71 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDHGB4Q9UN71 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGB4Q9UN71 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PCDHGB4Q9UN71 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDHGB4Q9UN71 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGB4Q9UN71 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHGB4Q9UN71 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGB4Q9UN71 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHGB4Q9UN71 AC079089.2-201ENST00000531211 1277 ntBASIC20.46■□□□□ 0.87
PCDHGB4Q9UN71 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGB4Q9UN71 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGB4Q9UN71 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGB4Q9UN71 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHGB4Q9UN71 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGB4Q9UN71 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PCDHGB4Q9UN71 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGB4Q9UN71 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
PCDHGB4Q9UN71 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGB4Q9UN71 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGB4Q9UN71 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms