Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE7Q9UBL6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE7Q9UBL6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE7Q9UBL6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CPNE7Q9UBL6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.66■□□□□ 0.9
CPNE7Q9UBL6 AC026185.1-201ENST00000445748 174 ntBASIC20.66■□□□□ 0.9
CPNE7Q9UBL6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.66■□□□□ 0.9
CPNE7Q9UBL6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.66■□□□□ 0.9
CPNE7Q9UBL6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE7Q9UBL6 KRT18P20-201ENST00000548986 1279 ntBASIC20.66■□□□□ 0.9
CPNE7Q9UBL6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE7Q9UBL6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.66■□□□□ 0.9
CPNE7Q9UBL6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE7Q9UBL6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE7Q9UBL6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE7Q9UBL6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE7Q9UBL6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
CPNE7Q9UBL6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE7Q9UBL6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE7Q9UBL6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE7Q9UBL6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CPNE7Q9UBL6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE7Q9UBL6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE7Q9UBL6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE7Q9UBL6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
CPNE7Q9UBL6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.65■□□□□ 0.9
CPNE7Q9UBL6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.65■□□□□ 0.9
CPNE7Q9UBL6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.65■□□□□ 0.9
CPNE7Q9UBL6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE7Q9UBL6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE7Q9UBL6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CPNE7Q9UBL6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.65■□□□□ 0.9
CPNE7Q9UBL6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.65■□□□□ 0.9
CPNE7Q9UBL6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.65■□□□□ 0.9
CPNE7Q9UBL6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.65■□□□□ 0.9
CPNE7Q9UBL6 MYCNOS-205ENST00000641950 531 ntBASIC20.65■□□□□ 0.9
CPNE7Q9UBL6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE7Q9UBL6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE7Q9UBL6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
CPNE7Q9UBL6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CPNE7Q9UBL6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPNE7Q9UBL6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE7Q9UBL6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE7Q9UBL6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE7Q9UBL6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CPNE7Q9UBL6 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.64■□□□□ 0.89
CPNE7Q9UBL6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE7Q9UBL6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CPNE7Q9UBL6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE7Q9UBL6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CPNE7Q9UBL6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPNE7Q9UBL6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CPNE7Q9UBL6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPNE7Q9UBL6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CPNE7Q9UBL6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.63■□□□□ 0.89
CPNE7Q9UBL6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.63■□□□□ 0.89
CPNE7Q9UBL6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.63■□□□□ 0.89
CPNE7Q9UBL6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.63■□□□□ 0.89
CPNE7Q9UBL6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.63■□□□□ 0.89
CPNE7Q9UBL6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPNE7Q9UBL6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.63■□□□□ 0.89
CPNE7Q9UBL6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPNE7Q9UBL6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CPNE7Q9UBL6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
CPNE7Q9UBL6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CPNE7Q9UBL6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CPNE7Q9UBL6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 AC003102.1-202ENST00000563394 1796 ntBASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE7Q9UBL6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE7Q9UBL6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CPNE7Q9UBL6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE7Q9UBL6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE7Q9UBL6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE7Q9UBL6 ID1-201ENST00000376105 1233 ntBASIC20.61■□□□□ 0.89
CPNE7Q9UBL6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE7Q9UBL6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.61■□□□□ 0.89
CPNE7Q9UBL6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.61■□□□□ 0.89
CPNE7Q9UBL6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.61■□□□□ 0.89
CPNE7Q9UBL6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms