Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LIN7CQ9NUP9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.63■□□□□ 0.41
LIN7CQ9NUP9 AC106739.1-201ENST00000617035 715 ntBASIC17.63■□□□□ 0.41
LIN7CQ9NUP9 AC136469.2-201ENST00000623944 1028 ntBASIC17.63■□□□□ 0.41
LIN7CQ9NUP9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIN7CQ9NUP9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIN7CQ9NUP9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIN7CQ9NUP9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.63■□□□□ 0.41
LIN7CQ9NUP9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIN7CQ9NUP9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIN7CQ9NUP9 AC133637.1-201ENST00000624115 1537 ntBASIC17.62■□□□□ 0.41
LIN7CQ9NUP9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIN7CQ9NUP9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.62■□□□□ 0.41
LIN7CQ9NUP9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIN7CQ9NUP9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.62■□□□□ 0.41
LIN7CQ9NUP9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.62■□□□□ 0.41
LIN7CQ9NUP9 PBX2P1-201ENST00000493219 1291 ntBASIC17.62■□□□□ 0.41
LIN7CQ9NUP9 AC079089.2-201ENST00000531211 1277 ntBASIC17.62■□□□□ 0.41
LIN7CQ9NUP9 AC024257.2-201ENST00000549699 147 ntBASIC17.62■□□□□ 0.41
LIN7CQ9NUP9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LIN7CQ9NUP9 AL031602.1-201ENST00000633169 911 ntBASIC17.62■□□□□ 0.41
LIN7CQ9NUP9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIN7CQ9NUP9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIN7CQ9NUP9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIN7CQ9NUP9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LIN7CQ9NUP9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.61■□□□□ 0.41
LIN7CQ9NUP9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIN7CQ9NUP9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LIN7CQ9NUP9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.61■□□□□ 0.41
LIN7CQ9NUP9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.61■□□□□ 0.41
LIN7CQ9NUP9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.61■□□□□ 0.41
LIN7CQ9NUP9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.61■□□□□ 0.41
LIN7CQ9NUP9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.61■□□□□ 0.41
LIN7CQ9NUP9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.61■□□□□ 0.41
LIN7CQ9NUP9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LIN7CQ9NUP9 OR7E47P-201ENST00000546390 1422 ntBASIC17.61■□□□□ 0.41
LIN7CQ9NUP9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIN7CQ9NUP9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIN7CQ9NUP9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIN7CQ9NUP9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
LIN7CQ9NUP9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIN7CQ9NUP9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LIN7CQ9NUP9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.6■□□□□ 0.41
LIN7CQ9NUP9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
LIN7CQ9NUP9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.6■□□□□ 0.41
LIN7CQ9NUP9 AC133561.4-201ENST00000566112 224 ntBASIC17.6■□□□□ 0.41
LIN7CQ9NUP9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.6■□□□□ 0.41
LIN7CQ9NUP9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIN7CQ9NUP9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LIN7CQ9NUP9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIN7CQ9NUP9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.6■□□□□ 0.41
LIN7CQ9NUP9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIN7CQ9NUP9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LIN7CQ9NUP9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
LIN7CQ9NUP9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIN7CQ9NUP9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LIN7CQ9NUP9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LIN7CQ9NUP9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LIN7CQ9NUP9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LIN7CQ9NUP9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
LIN7CQ9NUP9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
LIN7CQ9NUP9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LIN7CQ9NUP9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LIN7CQ9NUP9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LIN7CQ9NUP9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LIN7CQ9NUP9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LIN7CQ9NUP9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.58■□□□□ 0.41
LIN7CQ9NUP9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.58■□□□□ 0.41
LIN7CQ9NUP9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.58■□□□□ 0.41
LIN7CQ9NUP9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LIN7CQ9NUP9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.58■□□□□ 0.4
LIN7CQ9NUP9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIN7CQ9NUP9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.58■□□□□ 0.4
LIN7CQ9NUP9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIN7CQ9NUP9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.58■□□□□ 0.4
LIN7CQ9NUP9 EDA-201ENST00000338901 1233 ntBASIC17.58■□□□□ 0.4
LIN7CQ9NUP9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LIN7CQ9NUP9 MIR4767-201ENST00000582827 78 ntBASIC17.58■□□□□ 0.4
LIN7CQ9NUP9 FEM1AP4-201ENST00000443167 1987 ntBASIC17.58■□□□□ 0.4
LIN7CQ9NUP9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIN7CQ9NUP9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIN7CQ9NUP9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.58■□□□□ 0.4
LIN7CQ9NUP9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LIN7CQ9NUP9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LIN7CQ9NUP9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIN7CQ9NUP9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LIN7CQ9NUP9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIN7CQ9NUP9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIN7CQ9NUP9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LIN7CQ9NUP9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LIN7CQ9NUP9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIN7CQ9NUP9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIN7CQ9NUP9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.57■□□□□ 0.4
LIN7CQ9NUP9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LIN7CQ9NUP9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIN7CQ9NUP9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LIN7CQ9NUP9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LIN7CQ9NUP9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LIN7CQ9NUP9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.57■□□□□ 0.4
LIN7CQ9NUP9 AC068587.7-201ENST00000641602 218 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms