Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC52A3Q9NQ40 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC52A3Q9NQ40 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC52A3Q9NQ40 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC52A3Q9NQ40 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC52A3Q9NQ40 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SLC52A3Q9NQ40 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC52A3Q9NQ40 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC52A3Q9NQ40 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC52A3Q9NQ40 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC52A3Q9NQ40 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC52A3Q9NQ40 KRT16P3-201ENST00000439127 1283 ntBASIC20.19■□□□□ 0.82
SLC52A3Q9NQ40 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC52A3Q9NQ40 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC52A3Q9NQ40 AL512631.2-201ENST00000604634 923 ntBASIC20.19■□□□□ 0.82
SLC52A3Q9NQ40 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC52A3Q9NQ40 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC52A3Q9NQ40 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC52A3Q9NQ40 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC52A3Q9NQ40 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SLC52A3Q9NQ40 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.18■□□□□ 0.82
SLC52A3Q9NQ40 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A3Q9NQ40 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A3Q9NQ40 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A3Q9NQ40 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A3Q9NQ40 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SLC52A3Q9NQ40 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.18■□□□□ 0.82
SLC52A3Q9NQ40 AL034346.1-201ENST00000568244 1277 ntBASIC20.18■□□□□ 0.82
SLC52A3Q9NQ40 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SLC52A3Q9NQ40 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SLC52A3Q9NQ40 AP004607.7-201ENST00000527152 1677 ntBASIC20.18■□□□□ 0.82
SLC52A3Q9NQ40 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC52A3Q9NQ40 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A3Q9NQ40 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A3Q9NQ40 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC52A3Q9NQ40 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A3Q9NQ40 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SLC52A3Q9NQ40 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A3Q9NQ40 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A3Q9NQ40 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A3Q9NQ40 AL356740.2-201ENST00000601559 647 ntBASIC20.17■□□□□ 0.82
SLC52A3Q9NQ40 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A3Q9NQ40 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
SLC52A3Q9NQ40 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A3Q9NQ40 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A3Q9NQ40 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A3Q9NQ40 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SLC52A3Q9NQ40 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
SLC52A3Q9NQ40 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SLC52A3Q9NQ40 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SLC52A3Q9NQ40 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.17■□□□□ 0.82
SLC52A3Q9NQ40 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A3Q9NQ40 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SLC52A3Q9NQ40 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC52A3Q9NQ40 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC52A3Q9NQ40 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A3Q9NQ40 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC52A3Q9NQ40 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A3Q9NQ40 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A3Q9NQ40 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A3Q9NQ40 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
SLC52A3Q9NQ40 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A3Q9NQ40 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC52A3Q9NQ40 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC52A3Q9NQ40 AC092667.1-201ENST00000434301 2586 ntBASIC20.15■□□□□ 0.82
SLC52A3Q9NQ40 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SLC52A3Q9NQ40 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC52A3Q9NQ40 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC52A3Q9NQ40 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.15■□□□□ 0.82
SLC52A3Q9NQ40 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC52A3Q9NQ40 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.15■□□□□ 0.82
SLC52A3Q9NQ40 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC52A3Q9NQ40 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC52A3Q9NQ40 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC52A3Q9NQ40 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SLC52A3Q9NQ40 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.14■□□□□ 0.82
SLC52A3Q9NQ40 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SLC52A3Q9NQ40 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.14■□□□□ 0.81
SLC52A3Q9NQ40 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A3Q9NQ40 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A3Q9NQ40 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A3Q9NQ40 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
SLC52A3Q9NQ40 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SLC52A3Q9NQ40 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A3Q9NQ40 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
SLC52A3Q9NQ40 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A3Q9NQ40 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SLC52A3Q9NQ40 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
SLC52A3Q9NQ40 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.14■□□□□ 0.81
SLC52A3Q9NQ40 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A3Q9NQ40 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC52A3Q9NQ40 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SLC52A3Q9NQ40 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A3Q9NQ40 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
SLC52A3Q9NQ40 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SLC52A3Q9NQ40 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
SLC52A3Q9NQ40 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC52A3Q9NQ40 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC52A3Q9NQ40 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC52A3Q9NQ40 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms