Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VIPAS39Q9H9C1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VIPAS39Q9H9C1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VIPAS39Q9H9C1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
VIPAS39Q9H9C1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VIPAS39Q9H9C1 BX323043.1-201ENST00000641006 1765 ntBASIC21.84■■□□□ 1.09
VIPAS39Q9H9C1 SMG8-203ENST00000578922 2178 ntBASIC21.84■■□□□ 1.09
VIPAS39Q9H9C1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
VIPAS39Q9H9C1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VIPAS39Q9H9C1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VIPAS39Q9H9C1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VIPAS39Q9H9C1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
VIPAS39Q9H9C1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VIPAS39Q9H9C1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
VIPAS39Q9H9C1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.83■■□□□ 1.09
VIPAS39Q9H9C1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VIPAS39Q9H9C1 ABHD17AP4-201ENST00000411545 909 ntBASIC21.83■■□□□ 1.09
VIPAS39Q9H9C1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VIPAS39Q9H9C1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.83■■□□□ 1.09
VIPAS39Q9H9C1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
VIPAS39Q9H9C1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
VIPAS39Q9H9C1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VIPAS39Q9H9C1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
VIPAS39Q9H9C1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VIPAS39Q9H9C1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VIPAS39Q9H9C1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VIPAS39Q9H9C1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.82■■□□□ 1.08
VIPAS39Q9H9C1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.82■■□□□ 1.08
VIPAS39Q9H9C1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VIPAS39Q9H9C1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.82■■□□□ 1.08
VIPAS39Q9H9C1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VIPAS39Q9H9C1 MIR4281-201ENST00000580852 62 ntBASIC21.82■■□□□ 1.08
VIPAS39Q9H9C1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
VIPAS39Q9H9C1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VIPAS39Q9H9C1 PCDHAC2-203ENST00000615316 3011 ntBASIC21.82■■□□□ 1.08
VIPAS39Q9H9C1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VIPAS39Q9H9C1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
VIPAS39Q9H9C1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VIPAS39Q9H9C1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.81■■□□□ 1.08
VIPAS39Q9H9C1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VIPAS39Q9H9C1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
VIPAS39Q9H9C1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VIPAS39Q9H9C1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.81■■□□□ 1.08
VIPAS39Q9H9C1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VIPAS39Q9H9C1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.81■■□□□ 1.08
VIPAS39Q9H9C1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
VIPAS39Q9H9C1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
VIPAS39Q9H9C1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.8■■□□□ 1.08
VIPAS39Q9H9C1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
VIPAS39Q9H9C1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
VIPAS39Q9H9C1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VIPAS39Q9H9C1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VIPAS39Q9H9C1 THA1P-201ENST00000590384 1145 ntBASIC21.8■■□□□ 1.08
VIPAS39Q9H9C1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
VIPAS39Q9H9C1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VIPAS39Q9H9C1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
VIPAS39Q9H9C1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VIPAS39Q9H9C1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VIPAS39Q9H9C1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
VIPAS39Q9H9C1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VIPAS39Q9H9C1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
VIPAS39Q9H9C1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.79■■□□□ 1.08
VIPAS39Q9H9C1 AC018445.3-201ENST00000624177 1945 ntBASIC21.79■■□□□ 1.08
VIPAS39Q9H9C1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VIPAS39Q9H9C1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.79■■□□□ 1.08
VIPAS39Q9H9C1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.79■■□□□ 1.08
VIPAS39Q9H9C1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
VIPAS39Q9H9C1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VIPAS39Q9H9C1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
VIPAS39Q9H9C1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
VIPAS39Q9H9C1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VIPAS39Q9H9C1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VIPAS39Q9H9C1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.78■■□□□ 1.08
VIPAS39Q9H9C1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VIPAS39Q9H9C1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VIPAS39Q9H9C1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
VIPAS39Q9H9C1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VIPAS39Q9H9C1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.78■■□□□ 1.08
VIPAS39Q9H9C1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.78■■□□□ 1.08
VIPAS39Q9H9C1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VIPAS39Q9H9C1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.78■■□□□ 1.08
VIPAS39Q9H9C1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.78■■□□□ 1.08
VIPAS39Q9H9C1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
VIPAS39Q9H9C1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VIPAS39Q9H9C1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
VIPAS39Q9H9C1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VIPAS39Q9H9C1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.78■■□□□ 1.08
VIPAS39Q9H9C1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.77■■□□□ 1.08
VIPAS39Q9H9C1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
VIPAS39Q9H9C1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
VIPAS39Q9H9C1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
VIPAS39Q9H9C1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VIPAS39Q9H9C1 AC079089.2-201ENST00000531211 1277 ntBASIC21.77■■□□□ 1.08
VIPAS39Q9H9C1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VIPAS39Q9H9C1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.77■■□□□ 1.08
VIPAS39Q9H9C1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VIPAS39Q9H9C1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.77■■□□□ 1.07
VIPAS39Q9H9C1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.07
VIPAS39Q9H9C1 AC027702.1-201ENST00000563810 1770 ntBASIC21.76■■□□□ 1.07
VIPAS39Q9H9C1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms