Protein–RNA interactions for Protein: Q9H3R1

NDST4, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDST4Q9H3R1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NDST4Q9H3R1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NDST4Q9H3R1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NDST4Q9H3R1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NDST4Q9H3R1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NDST4Q9H3R1 PKD1P6-201ENST00000343738 4769 ntBASIC23.18■■□□□ 1.3
NDST4Q9H3R1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NDST4Q9H3R1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NDST4Q9H3R1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NDST4Q9H3R1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
NDST4Q9H3R1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NDST4Q9H3R1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
NDST4Q9H3R1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.17■■□□□ 1.3
NDST4Q9H3R1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
NDST4Q9H3R1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NDST4Q9H3R1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
NDST4Q9H3R1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NDST4Q9H3R1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.17■■□□□ 1.3
NDST4Q9H3R1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.17■■□□□ 1.3
NDST4Q9H3R1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NDST4Q9H3R1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NDST4Q9H3R1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NDST4Q9H3R1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NDST4Q9H3R1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NDST4Q9H3R1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
NDST4Q9H3R1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
NDST4Q9H3R1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NDST4Q9H3R1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NDST4Q9H3R1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.16■■□□□ 1.3
NDST4Q9H3R1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.16■■□□□ 1.3
NDST4Q9H3R1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
NDST4Q9H3R1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.16■■□□□ 1.3
NDST4Q9H3R1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.16■■□□□ 1.3
NDST4Q9H3R1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.16■■□□□ 1.3
NDST4Q9H3R1 AC126544.1-201ENST00000580842 1059 ntBASIC23.16■■□□□ 1.3
NDST4Q9H3R1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.16■■□□□ 1.3
NDST4Q9H3R1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NDST4Q9H3R1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
NDST4Q9H3R1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.16■■□□□ 1.3
NDST4Q9H3R1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
NDST4Q9H3R1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.16■■□□□ 1.3
NDST4Q9H3R1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NDST4Q9H3R1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
NDST4Q9H3R1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NDST4Q9H3R1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NDST4Q9H3R1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NDST4Q9H3R1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.15■■□□□ 1.3
NDST4Q9H3R1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NDST4Q9H3R1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NDST4Q9H3R1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NDST4Q9H3R1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NDST4Q9H3R1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.15■■□□□ 1.3
NDST4Q9H3R1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NDST4Q9H3R1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.14■■□□□ 1.3
NDST4Q9H3R1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
NDST4Q9H3R1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
NDST4Q9H3R1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
NDST4Q9H3R1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
NDST4Q9H3R1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NDST4Q9H3R1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.14■■□□□ 1.29
NDST4Q9H3R1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.14■■□□□ 1.29
NDST4Q9H3R1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.14■■□□□ 1.29
NDST4Q9H3R1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.14■■□□□ 1.29
NDST4Q9H3R1 IGHV3-19-201ENST00000521488 291 ntBASIC23.14■■□□□ 1.29
NDST4Q9H3R1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NDST4Q9H3R1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NDST4Q9H3R1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.14■■□□□ 1.29
NDST4Q9H3R1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
NDST4Q9H3R1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NDST4Q9H3R1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NDST4Q9H3R1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NDST4Q9H3R1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NDST4Q9H3R1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NDST4Q9H3R1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NDST4Q9H3R1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.13■■□□□ 1.29
NDST4Q9H3R1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.13■■□□□ 1.29
NDST4Q9H3R1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.13■■□□□ 1.29
NDST4Q9H3R1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
NDST4Q9H3R1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
NDST4Q9H3R1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NDST4Q9H3R1 AC008406.3-201ENST00000620001 1374 ntBASIC23.13■■□□□ 1.29
NDST4Q9H3R1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NDST4Q9H3R1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NDST4Q9H3R1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
NDST4Q9H3R1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NDST4Q9H3R1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
NDST4Q9H3R1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NDST4Q9H3R1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NDST4Q9H3R1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.12■■□□□ 1.29
NDST4Q9H3R1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.12■■□□□ 1.29
NDST4Q9H3R1 AC008764.7-201ENST00000593779 1081 ntBASIC23.12■■□□□ 1.29
NDST4Q9H3R1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.12■■□□□ 1.29
NDST4Q9H3R1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
NDST4Q9H3R1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NDST4Q9H3R1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NDST4Q9H3R1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
NDST4Q9H3R1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NDST4Q9H3R1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NDST4Q9H3R1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NDST4Q9H3R1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms