Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RSPO3Q9BXY4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO3Q9BXY4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO3Q9BXY4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RSPO3Q9BXY4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.63■□□□□ 0.73
RSPO3Q9BXY4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO3Q9BXY4 AP006587.3-201ENST00000525742 1516 ntBASIC19.63■□□□□ 0.73
RSPO3Q9BXY4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO3Q9BXY4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.63■□□□□ 0.73
RSPO3Q9BXY4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.63■□□□□ 0.73
RSPO3Q9BXY4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.63■□□□□ 0.73
RSPO3Q9BXY4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
RSPO3Q9BXY4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RSPO3Q9BXY4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RSPO3Q9BXY4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.62■□□□□ 0.73
RSPO3Q9BXY4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RSPO3Q9BXY4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RSPO3Q9BXY4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RSPO3Q9BXY4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RSPO3Q9BXY4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.62■□□□□ 0.73
RSPO3Q9BXY4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.62■□□□□ 0.73
RSPO3Q9BXY4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.62■□□□□ 0.73
RSPO3Q9BXY4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.62■□□□□ 0.73
RSPO3Q9BXY4 AL136162.1-201ENST00000607711 1078 ntBASIC19.62■□□□□ 0.73
RSPO3Q9BXY4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RSPO3Q9BXY4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RSPO3Q9BXY4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO3Q9BXY4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO3Q9BXY4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO3Q9BXY4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.61■□□□□ 0.73
RSPO3Q9BXY4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.61■□□□□ 0.73
RSPO3Q9BXY4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO3Q9BXY4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO3Q9BXY4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO3Q9BXY4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO3Q9BXY4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO3Q9BXY4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RSPO3Q9BXY4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RSPO3Q9BXY4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO3Q9BXY4 AC233992.3-201ENST00000607491 485 ntBASIC19.61■□□□□ 0.73
RSPO3Q9BXY4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RSPO3Q9BXY4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
RSPO3Q9BXY4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
RSPO3Q9BXY4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 AC131212.1-201ENST00000613771 668 ntBASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 AC073130.3-201ENST00000624389 2278 ntBASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RSPO3Q9BXY4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 AL034346.1-201ENST00000568244 1277 ntBASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
RSPO3Q9BXY4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RSPO3Q9BXY4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
RSPO3Q9BXY4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RSPO3Q9BXY4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
RSPO3Q9BXY4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.58■□□□□ 0.73
RSPO3Q9BXY4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.58■□□□□ 0.72
RSPO3Q9BXY4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.58■□□□□ 0.72
RSPO3Q9BXY4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.58■□□□□ 0.72
RSPO3Q9BXY4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RSPO3Q9BXY4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms