Protein–RNA interactions for Protein: Q9BQ31

KCNS3, Potassium voltage-gated channel subfamily S member 3, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS3Q9BQ31 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.41■□□□□ 0.7
KCNS3Q9BQ31 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNS3Q9BQ31 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNS3Q9BQ31 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCNS3Q9BQ31 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
KCNS3Q9BQ31 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.41■□□□□ 0.7
KCNS3Q9BQ31 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCNS3Q9BQ31 EDA-201ENST00000338901 1233 ntBASIC19.4■□□□□ 0.7
KCNS3Q9BQ31 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.4■□□□□ 0.7
KCNS3Q9BQ31 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCNS3Q9BQ31 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KCNS3Q9BQ31 AC011298.3-201ENST00000615796 283 ntBASIC19.4■□□□□ 0.7
KCNS3Q9BQ31 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KCNS3Q9BQ31 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.4■□□□□ 0.7
KCNS3Q9BQ31 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
KCNS3Q9BQ31 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCNS3Q9BQ31 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
KCNS3Q9BQ31 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
KCNS3Q9BQ31 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KCNS3Q9BQ31 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KCNS3Q9BQ31 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.39■□□□□ 0.69
KCNS3Q9BQ31 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCNS3Q9BQ31 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCNS3Q9BQ31 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.39■□□□□ 0.69
KCNS3Q9BQ31 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.39■□□□□ 0.69
KCNS3Q9BQ31 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.39■□□□□ 0.69
KCNS3Q9BQ31 FP325331.1-202ENST00000623531 1380 ntBASIC19.39■□□□□ 0.69
KCNS3Q9BQ31 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNS3Q9BQ31 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNS3Q9BQ31 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNS3Q9BQ31 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCNS3Q9BQ31 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
KCNS3Q9BQ31 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
KCNS3Q9BQ31 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNS3Q9BQ31 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
KCNS3Q9BQ31 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNS3Q9BQ31 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCNS3Q9BQ31 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNS3Q9BQ31 AC006455.2-201ENST00000429931 906 ntBASIC19.38■□□□□ 0.69
KCNS3Q9BQ31 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNS3Q9BQ31 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCNS3Q9BQ31 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.38■□□□□ 0.69
KCNS3Q9BQ31 pRNA.6-201ENST00000610482 90 ntBASIC19.38■□□□□ 0.69
KCNS3Q9BQ31 pRNA.5-201ENST00000612139 90 ntBASIC19.38■□□□□ 0.69
KCNS3Q9BQ31 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCNS3Q9BQ31 pRNA.11-201ENST00000618423 90 ntBASIC19.38■□□□□ 0.69
KCNS3Q9BQ31 pRNA.13-201ENST00000619112 90 ntBASIC19.38■□□□□ 0.69
KCNS3Q9BQ31 AL355001.2-201ENST00000620617 1191 ntBASIC19.38■□□□□ 0.69
KCNS3Q9BQ31 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNS3Q9BQ31 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCNS3Q9BQ31 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
KCNS3Q9BQ31 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNS3Q9BQ31 LINC01521-201ENST00000504184 1943 ntBASIC19.37■□□□□ 0.69
KCNS3Q9BQ31 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCNS3Q9BQ31 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNS3Q9BQ31 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.37■□□□□ 0.69
KCNS3Q9BQ31 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
KCNS3Q9BQ31 AC144652.1-201ENST00000609974 1624 ntBASIC19.37■□□□□ 0.69
KCNS3Q9BQ31 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNS3Q9BQ31 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNS3Q9BQ31 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNS3Q9BQ31 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.37■□□□□ 0.69
KCNS3Q9BQ31 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCNS3Q9BQ31 MIR4767-201ENST00000582827 78 ntBASIC19.37■□□□□ 0.69
KCNS3Q9BQ31 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.37■□□□□ 0.69
KCNS3Q9BQ31 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
KCNS3Q9BQ31 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.37■□□□□ 0.69
KCNS3Q9BQ31 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNS3Q9BQ31 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCNS3Q9BQ31 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KCNS3Q9BQ31 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KCNS3Q9BQ31 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNS3Q9BQ31 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNS3Q9BQ31 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.36■□□□□ 0.69
KCNS3Q9BQ31 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNS3Q9BQ31 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.36■□□□□ 0.69
KCNS3Q9BQ31 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNS3Q9BQ31 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.36■□□□□ 0.69
KCNS3Q9BQ31 MIR3181-201ENST00000578512 73 ntBASIC19.36■□□□□ 0.69
KCNS3Q9BQ31 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.36■□□□□ 0.69
KCNS3Q9BQ31 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.36■□□□□ 0.69
KCNS3Q9BQ31 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KCNS3Q9BQ31 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.36■□□□□ 0.69
KCNS3Q9BQ31 LINC01529-204ENST00000636474 1715 ntBASIC19.36■□□□□ 0.69
KCNS3Q9BQ31 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCNS3Q9BQ31 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KCNS3Q9BQ31 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
KCNS3Q9BQ31 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCNS3Q9BQ31 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.35■□□□□ 0.69
KCNS3Q9BQ31 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCNS3Q9BQ31 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.35■□□□□ 0.69
KCNS3Q9BQ31 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KCNS3Q9BQ31 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.35■□□□□ 0.69
KCNS3Q9BQ31 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCNS3Q9BQ31 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCNS3Q9BQ31 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
KCNS3Q9BQ31 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNS3Q9BQ31 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
KCNS3Q9BQ31 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.34■□□□□ 0.69
KCNS3Q9BQ31 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms