Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE1Q99829 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE1Q99829 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.24■□□□□ 0.99
CPNE1Q99829 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE1Q99829 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE1Q99829 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.24■□□□□ 0.99
CPNE1Q99829 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.24■□□□□ 0.99
CPNE1Q99829 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE1Q99829 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE1Q99829 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE1Q99829 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE1Q99829 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE1Q99829 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.23■□□□□ 0.99
CPNE1Q99829 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CPNE1Q99829 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.23■□□□□ 0.99
CPNE1Q99829 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.23■□□□□ 0.99
CPNE1Q99829 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.23■□□□□ 0.99
CPNE1Q99829 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.23■□□□□ 0.99
CPNE1Q99829 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.23■□□□□ 0.99
CPNE1Q99829 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE1Q99829 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CPNE1Q99829 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CPNE1Q99829 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.23■□□□□ 0.99
CPNE1Q99829 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE1Q99829 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE1Q99829 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.22■□□□□ 0.99
CPNE1Q99829 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CPNE1Q99829 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.22■□□□□ 0.99
CPNE1Q99829 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.22■□□□□ 0.99
CPNE1Q99829 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.22■□□□□ 0.99
CPNE1Q99829 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.22■□□□□ 0.99
CPNE1Q99829 AP006587.3-201ENST00000525742 1516 ntBASIC21.22■□□□□ 0.99
CPNE1Q99829 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CPNE1Q99829 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.22■□□□□ 0.99
CPNE1Q99829 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE1Q99829 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE1Q99829 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE1Q99829 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE1Q99829 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.21■□□□□ 0.99
CPNE1Q99829 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE1Q99829 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.21■□□□□ 0.99
CPNE1Q99829 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE1Q99829 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE1Q99829 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CPNE1Q99829 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.21■□□□□ 0.99
CPNE1Q99829 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE1Q99829 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CPNE1Q99829 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE1Q99829 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE1Q99829 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE1Q99829 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CPNE1Q99829 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE1Q99829 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CPNE1Q99829 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CPNE1Q99829 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CPNE1Q99829 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.2■□□□□ 0.99
CPNE1Q99829 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CPNE1Q99829 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE1Q99829 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.2■□□□□ 0.98
CPNE1Q99829 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.2■□□□□ 0.98
CPNE1Q99829 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.2■□□□□ 0.98
CPNE1Q99829 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE1Q99829 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.2■□□□□ 0.98
CPNE1Q99829 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.2■□□□□ 0.98
CPNE1Q99829 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE1Q99829 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.2■□□□□ 0.98
CPNE1Q99829 AL049796.1-201ENST00000565336 1766 ntBASIC21.2■□□□□ 0.98
CPNE1Q99829 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE1Q99829 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE1Q99829 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.2■□□□□ 0.98
CPNE1Q99829 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.19■□□□□ 0.98
CPNE1Q99829 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CPNE1Q99829 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.19■□□□□ 0.98
CPNE1Q99829 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE1Q99829 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.19■□□□□ 0.98
CPNE1Q99829 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CPNE1Q99829 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CPNE1Q99829 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.19■□□□□ 0.98
CPNE1Q99829 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE1Q99829 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE1Q99829 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.19■□□□□ 0.98
CPNE1Q99829 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE1Q99829 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE1Q99829 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE1Q99829 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE1Q99829 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.19■□□□□ 0.98
CPNE1Q99829 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE1Q99829 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CPNE1Q99829 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE1Q99829 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE1Q99829 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.18■□□□□ 0.98
CPNE1Q99829 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE1Q99829 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE1Q99829 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CPNE1Q99829 BX842568.3-201ENST00000418104 571 ntBASIC21.18■□□□□ 0.98
CPNE1Q99829 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CPNE1Q99829 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE1Q99829 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.18■□□□□ 0.98
CPNE1Q99829 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE1Q99829 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms