Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.01■□□□□ 0.79
NR1H4Q96RI1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.01■□□□□ 0.79
NR1H4Q96RI1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NR1H4Q96RI1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.01■□□□□ 0.79
NR1H4Q96RI1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NR1H4Q96RI1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NR1H4Q96RI1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NR1H4Q96RI1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NR1H4Q96RI1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NR1H4Q96RI1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NR1H4Q96RI1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20■□□□□ 0.79
NR1H4Q96RI1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NR1H4Q96RI1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20■□□□□ 0.79
NR1H4Q96RI1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NR1H4Q96RI1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NR1H4Q96RI1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NR1H4Q96RI1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20■□□□□ 0.79
NR1H4Q96RI1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20■□□□□ 0.79
NR1H4Q96RI1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NR1H4Q96RI1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NR1H4Q96RI1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NR1H4Q96RI1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.99■□□□□ 0.79
NR1H4Q96RI1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NR1H4Q96RI1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NR1H4Q96RI1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NR1H4Q96RI1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NR1H4Q96RI1 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.99■□□□□ 0.79
NR1H4Q96RI1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NR1H4Q96RI1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.99■□□□□ 0.79
NR1H4Q96RI1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.99■□□□□ 0.79
NR1H4Q96RI1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.99■□□□□ 0.79
NR1H4Q96RI1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NR1H4Q96RI1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
NR1H4Q96RI1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.99■□□□□ 0.79
NR1H4Q96RI1 PCDHAC2-203ENST00000615316 3011 ntBASIC19.99■□□□□ 0.79
NR1H4Q96RI1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NR1H4Q96RI1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NR1H4Q96RI1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NR1H4Q96RI1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.99■□□□□ 0.79
NR1H4Q96RI1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NR1H4Q96RI1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NR1H4Q96RI1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NR1H4Q96RI1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.98■□□□□ 0.79
NR1H4Q96RI1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
NR1H4Q96RI1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NR1H4Q96RI1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NR1H4Q96RI1 AC073314.1-201ENST00000568729 2216 ntBASIC19.98■□□□□ 0.79
NR1H4Q96RI1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
NR1H4Q96RI1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.98■□□□□ 0.79
NR1H4Q96RI1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.98■□□□□ 0.79
NR1H4Q96RI1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.98■□□□□ 0.79
NR1H4Q96RI1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
NR1H4Q96RI1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NR1H4Q96RI1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NR1H4Q96RI1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NR1H4Q96RI1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NR1H4Q96RI1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NR1H4Q96RI1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NR1H4Q96RI1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NR1H4Q96RI1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.97■□□□□ 0.79
NR1H4Q96RI1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.97■□□□□ 0.79
NR1H4Q96RI1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NR1H4Q96RI1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
NR1H4Q96RI1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NR1H4Q96RI1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NR1H4Q96RI1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
NR1H4Q96RI1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NR1H4Q96RI1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.97■□□□□ 0.79
NR1H4Q96RI1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
NR1H4Q96RI1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NR1H4Q96RI1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
NR1H4Q96RI1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.97■□□□□ 0.79
NR1H4Q96RI1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NR1H4Q96RI1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NR1H4Q96RI1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.96■□□□□ 0.79
NR1H4Q96RI1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NR1H4Q96RI1 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.96■□□□□ 0.79
NR1H4Q96RI1 AC026202.3-201ENST00000600805 1127 ntBASIC19.96■□□□□ 0.79
NR1H4Q96RI1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NR1H4Q96RI1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.96■□□□□ 0.79
NR1H4Q96RI1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NR1H4Q96RI1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NR1H4Q96RI1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NR1H4Q96RI1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NR1H4Q96RI1 AC098818.2-201ENST00000564925 2320 ntBASIC19.96■□□□□ 0.79
NR1H4Q96RI1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NR1H4Q96RI1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
NR1H4Q96RI1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NR1H4Q96RI1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms