Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPRD1AQ96P16 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.95■■□□□ 1.1
RPRD1AQ96P16 AC092666.2-201ENST00000613287 246 ntBASIC21.95■■□□□ 1.1
RPRD1AQ96P16 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPRD1AQ96P16 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPRD1AQ96P16 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPRD1AQ96P16 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RPRD1AQ96P16 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.95■■□□□ 1.1
RPRD1AQ96P16 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPRD1AQ96P16 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPRD1AQ96P16 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPRD1AQ96P16 KRT19P1-201ENST00000405746 1186 ntBASIC21.94■■□□□ 1.1
RPRD1AQ96P16 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
RPRD1AQ96P16 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.94■■□□□ 1.1
RPRD1AQ96P16 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.94■■□□□ 1.1
RPRD1AQ96P16 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.94■■□□□ 1.1
RPRD1AQ96P16 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.94■■□□□ 1.1
RPRD1AQ96P16 AC022517.1-201ENST00000592429 346 ntBASIC21.94■■□□□ 1.1
RPRD1AQ96P16 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RPRD1AQ96P16 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RPRD1AQ96P16 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RPRD1AQ96P16 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPRD1AQ96P16 AC003102.1-202ENST00000563394 1796 ntBASIC21.94■■□□□ 1.1
RPRD1AQ96P16 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPRD1AQ96P16 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPRD1AQ96P16 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
RPRD1AQ96P16 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RPRD1AQ96P16 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
RPRD1AQ96P16 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RPRD1AQ96P16 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RPRD1AQ96P16 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.93■■□□□ 1.1
RPRD1AQ96P16 AC104187.1-201ENST00000607510 612 ntBASIC21.93■■□□□ 1.1
RPRD1AQ96P16 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RPRD1AQ96P16 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPRD1AQ96P16 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPRD1AQ96P16 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPRD1AQ96P16 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RPRD1AQ96P16 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
RPRD1AQ96P16 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.92■■□□□ 1.1
RPRD1AQ96P16 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPRD1AQ96P16 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPRD1AQ96P16 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RPRD1AQ96P16 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPRD1AQ96P16 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.92■■□□□ 1.1
RPRD1AQ96P16 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPRD1AQ96P16 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.92■■□□□ 1.1
RPRD1AQ96P16 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RPRD1AQ96P16 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RPRD1AQ96P16 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RPRD1AQ96P16 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.91■■□□□ 1.1
RPRD1AQ96P16 EP400NL-214ENST00000641289 2402 ntBASIC21.91■■□□□ 1.1
RPRD1AQ96P16 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RPRD1AQ96P16 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RPRD1AQ96P16 AC010542.4-201ENST00000563151 1910 ntBASIC21.91■■□□□ 1.1
RPRD1AQ96P16 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
RPRD1AQ96P16 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.91■■□□□ 1.1
RPRD1AQ96P16 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.91■■□□□ 1.1
RPRD1AQ96P16 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RPRD1AQ96P16 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RPRD1AQ96P16 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
RPRD1AQ96P16 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RPRD1AQ96P16 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPRD1AQ96P16 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RPRD1AQ96P16 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPRD1AQ96P16 C11orf96-202ENST00000528572 1834 ntBASIC21.9■■□□□ 1.1
RPRD1AQ96P16 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPRD1AQ96P16 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPRD1AQ96P16 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.9■■□□□ 1.1
RPRD1AQ96P16 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.9■■□□□ 1.1
RPRD1AQ96P16 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
RPRD1AQ96P16 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPRD1AQ96P16 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RPRD1AQ96P16 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPRD1AQ96P16 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPRD1AQ96P16 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPRD1AQ96P16 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPRD1AQ96P16 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RPRD1AQ96P16 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPRD1AQ96P16 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RPRD1AQ96P16 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
RPRD1AQ96P16 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.89■■□□□ 1.09
RPRD1AQ96P16 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.89■■□□□ 1.09
RPRD1AQ96P16 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RPRD1AQ96P16 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.89■■□□□ 1.09
RPRD1AQ96P16 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.89■■□□□ 1.09
RPRD1AQ96P16 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
RPRD1AQ96P16 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RPRD1AQ96P16 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RPRD1AQ96P16 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.88■■□□□ 1.09
RPRD1AQ96P16 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
RPRD1AQ96P16 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RPRD1AQ96P16 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RPRD1AQ96P16 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RPRD1AQ96P16 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.88■■□□□ 1.09
RPRD1AQ96P16 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.88■■□□□ 1.09
RPRD1AQ96P16 EEF1DP3-203ENST00000566025 782 ntBASIC21.88■■□□□ 1.09
RPRD1AQ96P16 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.88■■□□□ 1.09
RPRD1AQ96P16 IKBKGP1-201ENST00000612193 1073 ntBASIC21.88■■□□□ 1.09
RPRD1AQ96P16 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RPRD1AQ96P16 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms