Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
NBPF4Q96M43 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
NBPF4Q96M43 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC28.24■■■□□ 2.11
NBPF4Q96M43 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC28.23■■■□□ 2.11
NBPF4Q96M43 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
NBPF4Q96M43 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
NBPF4Q96M43 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
NBPF4Q96M43 BET1L-204ENST00000410108 637 ntTSL 3 BASIC28.23■■■□□ 2.11
NBPF4Q96M43 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC28.23■■■□□ 2.11
NBPF4Q96M43 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
NBPF4Q96M43 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
NBPF4Q96M43 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
NBPF4Q96M43 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC28.22■■■□□ 2.11
NBPF4Q96M43 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
NBPF4Q96M43 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
NBPF4Q96M43 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC28.22■■■□□ 2.11
NBPF4Q96M43 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
NBPF4Q96M43 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC28.22■■■□□ 2.11
NBPF4Q96M43 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC28.22■■■□□ 2.11
NBPF4Q96M43 AC093323.1-202ENST00000635031 2045 ntBASIC28.22■■■□□ 2.11
NBPF4Q96M43 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
NBPF4Q96M43 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
NBPF4Q96M43 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
NBPF4Q96M43 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
NBPF4Q96M43 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
NBPF4Q96M43 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
NBPF4Q96M43 NFE2L3P1-201ENST00000588207 1959 ntBASIC28.21■■■□□ 2.11
NBPF4Q96M43 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
NBPF4Q96M43 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
NBPF4Q96M43 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
NBPF4Q96M43 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
NBPF4Q96M43 AL512625.2-201ENST00000417533 625 ntBASIC28.21■■■□□ 2.11
NBPF4Q96M43 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
NBPF4Q96M43 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
NBPF4Q96M43 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
NBPF4Q96M43 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
NBPF4Q96M43 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC28.21■■■□□ 2.11
NBPF4Q96M43 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
NBPF4Q96M43 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
NBPF4Q96M43 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC28.2■■■□□ 2.11
NBPF4Q96M43 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
NBPF4Q96M43 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC28.2■■■□□ 2.11
NBPF4Q96M43 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
NBPF4Q96M43 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
NBPF4Q96M43 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
NBPF4Q96M43 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.1
NBPF4Q96M43 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC28.2■■■□□ 2.1
NBPF4Q96M43 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC28.2■■■□□ 2.1
NBPF4Q96M43 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC28.2■■■□□ 2.1
NBPF4Q96M43 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
NBPF4Q96M43 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
NBPF4Q96M43 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC28.19■■■□□ 2.1
NBPF4Q96M43 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
NBPF4Q96M43 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
NBPF4Q96M43 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC28.19■■■□□ 2.1
NBPF4Q96M43 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
NBPF4Q96M43 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC28.19■■■□□ 2.1
NBPF4Q96M43 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
NBPF4Q96M43 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
NBPF4Q96M43 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
NBPF4Q96M43 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC28.19■■■□□ 2.1
NBPF4Q96M43 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC28.19■■■□□ 2.1
NBPF4Q96M43 FAM201B-201ENST00000458407 597 ntBASIC28.19■■■□□ 2.1
NBPF4Q96M43 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
NBPF4Q96M43 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC28.19■■■□□ 2.1
NBPF4Q96M43 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
NBPF4Q96M43 AC008175.2-201ENST00000612840 297 ntBASIC28.19■■■□□ 2.1
NBPF4Q96M43 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
NBPF4Q96M43 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC28.18■■■□□ 2.1
NBPF4Q96M43 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
NBPF4Q96M43 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC28.18■■■□□ 2.1
NBPF4Q96M43 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC28.18■■■□□ 2.1
NBPF4Q96M43 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC28.18■■■□□ 2.1
NBPF4Q96M43 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC28.18■■■□□ 2.1
NBPF4Q96M43 AC008687.6-201ENST00000596318 630 ntBASIC28.18■■■□□ 2.1
NBPF4Q96M43 AC092118.2-201ENST00000613495 667 ntBASIC28.18■■■□□ 2.1
NBPF4Q96M43 FGF8-207ENST00000618991 856 ntTSL 3 BASIC28.18■■■□□ 2.1
NBPF4Q96M43 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
NBPF4Q96M43 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC28.18■■■□□ 2.1
NBPF4Q96M43 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC28.18■■■□□ 2.1
NBPF4Q96M43 LTK-203ENST00000453182 2412 ntTSL 2 BASIC28.18■■■□□ 2.1
NBPF4Q96M43 RBM17P2-201ENST00000616397 1405 ntBASIC28.18■■■□□ 2.1
NBPF4Q96M43 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
NBPF4Q96M43 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC28.17■■■□□ 2.1
NBPF4Q96M43 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC28.17■■■□□ 2.1
NBPF4Q96M43 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC28.17■■■□□ 2.1
NBPF4Q96M43 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
NBPF4Q96M43 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC28.17■■■□□ 2.1
NBPF4Q96M43 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
NBPF4Q96M43 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
NBPF4Q96M43 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC28.16■■■□□ 2.1
NBPF4Q96M43 POU5F1P4-201ENST00000413175 1085 ntBASIC28.16■■■□□ 2.1
NBPF4Q96M43 POU5F1P3-201ENST00000428824 1078 ntBASIC28.16■■■□□ 2.1
NBPF4Q96M43 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC28.16■■■□□ 2.1
NBPF4Q96M43 RNA5SP413-201ENST00000516373 109 ntBASIC28.16■■■□□ 2.1
NBPF4Q96M43 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC28.16■■■□□ 2.1
NBPF4Q96M43 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC28.16■■■□□ 2.1
NBPF4Q96M43 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC28.15■■■□□ 2.1
NBPF4Q96M43 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
NBPF4Q96M43 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms