Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.75■□□□□ 0.27
NPIPB3Q92617 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPB3Q92617 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPB3Q92617 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NPIPB3Q92617 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
NPIPB3Q92617 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPB3Q92617 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPB3Q92617 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
NPIPB3Q92617 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.74■□□□□ 0.27
NPIPB3Q92617 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPB3Q92617 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPB3Q92617 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.74■□□□□ 0.27
NPIPB3Q92617 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPB3Q92617 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPB3Q92617 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPB3Q92617 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPB3Q92617 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPB3Q92617 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPB3Q92617 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.74■□□□□ 0.27
NPIPB3Q92617 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB3Q92617 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB3Q92617 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.73■□□□□ 0.27
NPIPB3Q92617 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB3Q92617 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.73■□□□□ 0.27
NPIPB3Q92617 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NPIPB3Q92617 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.73■□□□□ 0.27
NPIPB3Q92617 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.73■□□□□ 0.27
NPIPB3Q92617 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB3Q92617 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.73■□□□□ 0.27
NPIPB3Q92617 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB3Q92617 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB3Q92617 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.73■□□□□ 0.27
NPIPB3Q92617 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPB3Q92617 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NPIPB3Q92617 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.72■□□□□ 0.27
NPIPB3Q92617 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPB3Q92617 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPB3Q92617 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPB3Q92617 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
NPIPB3Q92617 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NPIPB3Q92617 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPB3Q92617 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPB3Q92617 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.72■□□□□ 0.27
NPIPB3Q92617 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NPIPB3Q92617 AL512631.2-201ENST00000604634 923 ntBASIC16.72■□□□□ 0.27
NPIPB3Q92617 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NPIPB3Q92617 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.72■□□□□ 0.27
NPIPB3Q92617 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NPIPB3Q92617 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NPIPB3Q92617 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPB3Q92617 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPB3Q92617 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPB3Q92617 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.71■□□□□ 0.27
NPIPB3Q92617 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.71■□□□□ 0.27
NPIPB3Q92617 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPB3Q92617 AL034346.1-201ENST00000568244 1277 ntBASIC16.71■□□□□ 0.27
NPIPB3Q92617 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.71■□□□□ 0.27
NPIPB3Q92617 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.71■□□□□ 0.27
NPIPB3Q92617 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPB3Q92617 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPB3Q92617 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
NPIPB3Q92617 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPB3Q92617 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPB3Q92617 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPB3Q92617 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.7■□□□□ 0.26
NPIPB3Q92617 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
NPIPB3Q92617 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.7■□□□□ 0.26
NPIPB3Q92617 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPB3Q92617 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPB3Q92617 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.7■□□□□ 0.26
NPIPB3Q92617 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPB3Q92617 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NPIPB3Q92617 SYT6-210ENST00000641643 1587 ntBASIC16.7■□□□□ 0.26
NPIPB3Q92617 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.7■□□□□ 0.26
NPIPB3Q92617 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.7■□□□□ 0.26
NPIPB3Q92617 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
NPIPB3Q92617 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NPIPB3Q92617 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NPIPB3Q92617 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.7■□□□□ 0.26
NPIPB3Q92617 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPB3Q92617 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPB3Q92617 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPB3Q92617 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPB3Q92617 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB3Q92617 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.69■□□□□ 0.26
NPIPB3Q92617 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB3Q92617 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB3Q92617 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB3Q92617 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB3Q92617 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NPIPB3Q92617 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB3Q92617 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
NPIPB3Q92617 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NPIPB3Q92617 SERBP1P1-201ENST00000396021 1160 ntBASIC16.69■□□□□ 0.26
NPIPB3Q92617 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NPIPB3Q92617 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB3Q92617 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NPIPB3Q92617 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB3Q92617 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.69■□□□□ 0.26
NPIPB3Q92617 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms