Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.41■■□□□ 1.66
SH3RF3Q8TEJ3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SH3RF3Q8TEJ3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
SH3RF3Q8TEJ3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.41■■□□□ 1.66
SH3RF3Q8TEJ3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SH3RF3Q8TEJ3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SH3RF3Q8TEJ3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.41■■□□□ 1.66
SH3RF3Q8TEJ3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SH3RF3Q8TEJ3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SH3RF3Q8TEJ3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SH3RF3Q8TEJ3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SH3RF3Q8TEJ3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SH3RF3Q8TEJ3 AC092053.2-201ENST00000640557 1818 ntBASIC25.4■■□□□ 1.66
SH3RF3Q8TEJ3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.4■■□□□ 1.66
SH3RF3Q8TEJ3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC25.4■■□□□ 1.66
SH3RF3Q8TEJ3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC25.4■■□□□ 1.66
SH3RF3Q8TEJ3 AC005181.1-201ENST00000604782 1256 ntBASIC25.4■■□□□ 1.66
SH3RF3Q8TEJ3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
SH3RF3Q8TEJ3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SH3RF3Q8TEJ3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SH3RF3Q8TEJ3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SH3RF3Q8TEJ3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
SH3RF3Q8TEJ3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SH3RF3Q8TEJ3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SH3RF3Q8TEJ3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SH3RF3Q8TEJ3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC25.39■■□□□ 1.66
SH3RF3Q8TEJ3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
SH3RF3Q8TEJ3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SH3RF3Q8TEJ3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC25.39■■□□□ 1.66
SH3RF3Q8TEJ3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC25.39■■□□□ 1.66
SH3RF3Q8TEJ3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.39■■□□□ 1.66
SH3RF3Q8TEJ3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.65
SH3RF3Q8TEJ3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
SH3RF3Q8TEJ3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.39■■□□□ 1.65
SH3RF3Q8TEJ3 AC026471.6-201ENST00000622954 1905 ntBASIC25.39■■□□□ 1.65
SH3RF3Q8TEJ3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
SH3RF3Q8TEJ3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
SH3RF3Q8TEJ3 AC003102.1-202ENST00000563394 1796 ntBASIC25.39■■□□□ 1.65
SH3RF3Q8TEJ3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SH3RF3Q8TEJ3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SH3RF3Q8TEJ3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.38■■□□□ 1.65
SH3RF3Q8TEJ3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC25.38■■□□□ 1.65
SH3RF3Q8TEJ3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SH3RF3Q8TEJ3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
SH3RF3Q8TEJ3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SH3RF3Q8TEJ3 GPX1P1-201ENST00000388829 606 ntBASIC25.38■■□□□ 1.65
SH3RF3Q8TEJ3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC25.38■■□□□ 1.65
SH3RF3Q8TEJ3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SH3RF3Q8TEJ3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SH3RF3Q8TEJ3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.38■■□□□ 1.65
SH3RF3Q8TEJ3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SH3RF3Q8TEJ3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.38■■□□□ 1.65
SH3RF3Q8TEJ3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.38■■□□□ 1.65
SH3RF3Q8TEJ3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SH3RF3Q8TEJ3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SH3RF3Q8TEJ3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SH3RF3Q8TEJ3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.37■■□□□ 1.65
SH3RF3Q8TEJ3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SH3RF3Q8TEJ3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.37■■□□□ 1.65
SH3RF3Q8TEJ3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC25.37■■□□□ 1.65
SH3RF3Q8TEJ3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
SH3RF3Q8TEJ3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
SH3RF3Q8TEJ3 AL355802.2-201ENST00000402069 882 ntBASIC25.37■■□□□ 1.65
SH3RF3Q8TEJ3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25.37■■□□□ 1.65
SH3RF3Q8TEJ3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SH3RF3Q8TEJ3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.36■■□□□ 1.65
SH3RF3Q8TEJ3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
SH3RF3Q8TEJ3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC25.36■■□□□ 1.65
SH3RF3Q8TEJ3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC25.36■■□□□ 1.65
SH3RF3Q8TEJ3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
SH3RF3Q8TEJ3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SH3RF3Q8TEJ3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC25.36■■□□□ 1.65
SH3RF3Q8TEJ3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC25.36■■□□□ 1.65
SH3RF3Q8TEJ3 SLC7A5P1-201ENST00000568957 537 ntBASIC25.36■■□□□ 1.65
SH3RF3Q8TEJ3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC25.36■■□□□ 1.65
SH3RF3Q8TEJ3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC25.36■■□□□ 1.65
SH3RF3Q8TEJ3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC25.36■■□□□ 1.65
SH3RF3Q8TEJ3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
SH3RF3Q8TEJ3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SH3RF3Q8TEJ3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
SH3RF3Q8TEJ3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SH3RF3Q8TEJ3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC25.36■■□□□ 1.65
SH3RF3Q8TEJ3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SH3RF3Q8TEJ3 AC083906.2-201ENST00000511578 360 ntBASIC25.35■■□□□ 1.65
SH3RF3Q8TEJ3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC25.35■■□□□ 1.65
SH3RF3Q8TEJ3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
SH3RF3Q8TEJ3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
SH3RF3Q8TEJ3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SH3RF3Q8TEJ3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.35■■□□□ 1.65
SH3RF3Q8TEJ3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
SH3RF3Q8TEJ3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.35■■□□□ 1.65
SH3RF3Q8TEJ3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.35■■□□□ 1.65
SH3RF3Q8TEJ3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SH3RF3Q8TEJ3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC25.34■■□□□ 1.65
SH3RF3Q8TEJ3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SH3RF3Q8TEJ3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SH3RF3Q8TEJ3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SH3RF3Q8TEJ3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SH3RF3Q8TEJ3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC25.34■■□□□ 1.65
SH3RF3Q8TEJ3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms