Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RPS4Y2Q8TD47 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS4Y2Q8TD47 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS4Y2Q8TD47 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.63■□□□□ 0.57
RPS4Y2Q8TD47 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 AC131212.1-201ENST00000613771 668 ntBASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 LINC01006-201ENST00000333319 2292 ntBASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.62■□□□□ 0.57
RPS4Y2Q8TD47 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4Y2Q8TD47 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RPS4Y2Q8TD47 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4Y2Q8TD47 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
RPS4Y2Q8TD47 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4Y2Q8TD47 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4Y2Q8TD47 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RPS4Y2Q8TD47 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4Y2Q8TD47 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.61■□□□□ 0.57
RPS4Y2Q8TD47 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.61■□□□□ 0.57
RPS4Y2Q8TD47 AC099791.2-201ENST00000605725 427 ntBASIC18.61■□□□□ 0.57
RPS4Y2Q8TD47 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.61■□□□□ 0.57
RPS4Y2Q8TD47 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.61■□□□□ 0.57
RPS4Y2Q8TD47 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4Y2Q8TD47 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4Y2Q8TD47 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS4Y2Q8TD47 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
RPS4Y2Q8TD47 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4Y2Q8TD47 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.6■□□□□ 0.57
RPS4Y2Q8TD47 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4Y2Q8TD47 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4Y2Q8TD47 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RPS4Y2Q8TD47 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.6■□□□□ 0.57
RPS4Y2Q8TD47 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4Y2Q8TD47 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4Y2Q8TD47 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4Y2Q8TD47 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4Y2Q8TD47 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
RPS4Y2Q8TD47 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS4Y2Q8TD47 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RPS4Y2Q8TD47 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4Y2Q8TD47 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RPS4Y2Q8TD47 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.59■□□□□ 0.57
RPS4Y2Q8TD47 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4Y2Q8TD47 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
RPS4Y2Q8TD47 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RPS4Y2Q8TD47 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4Y2Q8TD47 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.59■□□□□ 0.57
RPS4Y2Q8TD47 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.59■□□□□ 0.57
RPS4Y2Q8TD47 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4Y2Q8TD47 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4Y2Q8TD47 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.59■□□□□ 0.57
RPS4Y2Q8TD47 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4Y2Q8TD47 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.59■□□□□ 0.57
RPS4Y2Q8TD47 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS4Y2Q8TD47 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.59■□□□□ 0.57
RPS4Y2Q8TD47 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RPS4Y2Q8TD47 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.58■□□□□ 0.57
RPS4Y2Q8TD47 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.58■□□□□ 0.57
RPS4Y2Q8TD47 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.58■□□□□ 0.57
RPS4Y2Q8TD47 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
RPS4Y2Q8TD47 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.58■□□□□ 0.56
RPS4Y2Q8TD47 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.58■□□□□ 0.56
RPS4Y2Q8TD47 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPS4Y2Q8TD47 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPS4Y2Q8TD47 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPS4Y2Q8TD47 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RPS4Y2Q8TD47 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPS4Y2Q8TD47 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPS4Y2Q8TD47 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4Y2Q8TD47 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4Y2Q8TD47 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4Y2Q8TD47 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4Y2Q8TD47 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4Y2Q8TD47 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4Y2Q8TD47 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.57■□□□□ 0.56
RPS4Y2Q8TD47 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4Y2Q8TD47 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.57■□□□□ 0.56
RPS4Y2Q8TD47 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4Y2Q8TD47 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.57■□□□□ 0.56
RPS4Y2Q8TD47 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.57■□□□□ 0.56
RPS4Y2Q8TD47 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4Y2Q8TD47 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.57■□□□□ 0.56
RPS4Y2Q8TD47 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms