Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNIH3Q8TBE1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNIH3Q8TBE1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.4■□□□□ 0.7
CNIH3Q8TBE1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNIH3Q8TBE1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.4■□□□□ 0.7
CNIH3Q8TBE1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNIH3Q8TBE1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNIH3Q8TBE1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNIH3Q8TBE1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.4■□□□□ 0.7
CNIH3Q8TBE1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNIH3Q8TBE1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNIH3Q8TBE1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNIH3Q8TBE1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNIH3Q8TBE1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNIH3Q8TBE1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNIH3Q8TBE1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNIH3Q8TBE1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CNIH3Q8TBE1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.4■□□□□ 0.7
CNIH3Q8TBE1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNIH3Q8TBE1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNIH3Q8TBE1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.39■□□□□ 0.69
CNIH3Q8TBE1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNIH3Q8TBE1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.39■□□□□ 0.69
CNIH3Q8TBE1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.39■□□□□ 0.69
CNIH3Q8TBE1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNIH3Q8TBE1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.39■□□□□ 0.69
CNIH3Q8TBE1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNIH3Q8TBE1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CNIH3Q8TBE1 GABARAPL3-202ENST00000624044 1851 ntBASIC19.39■□□□□ 0.69
CNIH3Q8TBE1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.39■□□□□ 0.69
CNIH3Q8TBE1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.39■□□□□ 0.69
CNIH3Q8TBE1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.39■□□□□ 0.69
CNIH3Q8TBE1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNIH3Q8TBE1 AC073314.1-201ENST00000568729 2216 ntBASIC19.39■□□□□ 0.69
CNIH3Q8TBE1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNIH3Q8TBE1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.39■□□□□ 0.69
CNIH3Q8TBE1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNIH3Q8TBE1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNIH3Q8TBE1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNIH3Q8TBE1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CNIH3Q8TBE1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNIH3Q8TBE1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNIH3Q8TBE1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CNIH3Q8TBE1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CNIH3Q8TBE1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNIH3Q8TBE1 AP005212.1-201ENST00000581547 1997 ntBASIC19.38■□□□□ 0.69
CNIH3Q8TBE1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNIH3Q8TBE1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CNIH3Q8TBE1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CNIH3Q8TBE1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNIH3Q8TBE1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNIH3Q8TBE1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNIH3Q8TBE1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.37■□□□□ 0.69
CNIH3Q8TBE1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNIH3Q8TBE1 AC079089.2-201ENST00000531211 1277 ntBASIC19.37■□□□□ 0.69
CNIH3Q8TBE1 AC010980.1-201ENST00000587192 1142 ntBASIC19.37■□□□□ 0.69
CNIH3Q8TBE1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.37■□□□□ 0.69
CNIH3Q8TBE1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CNIH3Q8TBE1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNIH3Q8TBE1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNIH3Q8TBE1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNIH3Q8TBE1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.37■□□□□ 0.69
CNIH3Q8TBE1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.37■□□□□ 0.69
CNIH3Q8TBE1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNIH3Q8TBE1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNIH3Q8TBE1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CNIH3Q8TBE1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.36■□□□□ 0.69
CNIH3Q8TBE1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNIH3Q8TBE1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
CNIH3Q8TBE1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNIH3Q8TBE1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNIH3Q8TBE1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNIH3Q8TBE1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNIH3Q8TBE1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNIH3Q8TBE1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.36■□□□□ 0.69
CNIH3Q8TBE1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNIH3Q8TBE1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNIH3Q8TBE1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNIH3Q8TBE1 MIR6722-201ENST00000617286 78 ntBASIC19.36■□□□□ 0.69
CNIH3Q8TBE1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.36■□□□□ 0.69
CNIH3Q8TBE1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.36■□□□□ 0.69
CNIH3Q8TBE1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNIH3Q8TBE1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNIH3Q8TBE1 AC009102.2-201ENST00000606772 1639 ntBASIC19.36■□□□□ 0.69
CNIH3Q8TBE1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNIH3Q8TBE1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.36■□□□□ 0.69
CNIH3Q8TBE1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNIH3Q8TBE1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNIH3Q8TBE1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.35■□□□□ 0.69
CNIH3Q8TBE1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNIH3Q8TBE1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNIH3Q8TBE1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNIH3Q8TBE1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.35■□□□□ 0.69
CNIH3Q8TBE1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.35■□□□□ 0.69
CNIH3Q8TBE1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CNIH3Q8TBE1 AC074183.2-201ENST00000623112 922 ntBASIC19.35■□□□□ 0.69
CNIH3Q8TBE1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CNIH3Q8TBE1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNIH3Q8TBE1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNIH3Q8TBE1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms