Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
RFWD2Q8NHY2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RFWD2Q8NHY2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD2Q8NHY2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
RFWD2Q8NHY2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD2Q8NHY2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.97■□□□□ 0.95
RFWD2Q8NHY2 BX664725.1-201ENST00000438252 379 ntBASIC20.97■□□□□ 0.95
RFWD2Q8NHY2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.97■□□□□ 0.95
RFWD2Q8NHY2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RFWD2Q8NHY2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.97■□□□□ 0.95
RFWD2Q8NHY2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD2Q8NHY2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD2Q8NHY2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD2Q8NHY2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD2Q8NHY2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD2Q8NHY2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.97■□□□□ 0.95
RFWD2Q8NHY2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
RFWD2Q8NHY2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.97■□□□□ 0.95
RFWD2Q8NHY2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD2Q8NHY2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD2Q8NHY2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFWD2Q8NHY2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
RFWD2Q8NHY2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RFWD2Q8NHY2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFWD2Q8NHY2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RFWD2Q8NHY2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFWD2Q8NHY2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RFWD2Q8NHY2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.96■□□□□ 0.95
RFWD2Q8NHY2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFWD2Q8NHY2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RFWD2Q8NHY2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RFWD2Q8NHY2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFWD2Q8NHY2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RFWD2Q8NHY2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RFWD2Q8NHY2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD2Q8NHY2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RFWD2Q8NHY2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.95■□□□□ 0.94
RFWD2Q8NHY2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.95■□□□□ 0.94
RFWD2Q8NHY2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD2Q8NHY2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD2Q8NHY2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD2Q8NHY2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD2Q8NHY2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.95■□□□□ 0.94
RFWD2Q8NHY2 AL451085.2-201ENST00000605085 799 ntBASIC20.95■□□□□ 0.94
RFWD2Q8NHY2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD2Q8NHY2 AC137630.3-201ENST00000607245 391 ntBASIC20.95■□□□□ 0.94
RFWD2Q8NHY2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RFWD2Q8NHY2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RFWD2Q8NHY2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD2Q8NHY2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD2Q8NHY2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD2Q8NHY2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD2Q8NHY2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFWD2Q8NHY2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.94■□□□□ 0.94
RFWD2Q8NHY2 AC079089.2-201ENST00000531211 1277 ntBASIC20.94■□□□□ 0.94
RFWD2Q8NHY2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.94■□□□□ 0.94
RFWD2Q8NHY2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.94■□□□□ 0.94
RFWD2Q8NHY2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RFWD2Q8NHY2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RFWD2Q8NHY2 AL049796.1-201ENST00000565336 1766 ntBASIC20.94■□□□□ 0.94
RFWD2Q8NHY2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.94■□□□□ 0.94
RFWD2Q8NHY2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFWD2Q8NHY2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.94■□□□□ 0.94
RFWD2Q8NHY2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFWD2Q8NHY2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFWD2Q8NHY2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFWD2Q8NHY2 OXCT2P1-201ENST00000447263 1535 ntBASIC20.94■□□□□ 0.94
RFWD2Q8NHY2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.93■□□□□ 0.94
RFWD2Q8NHY2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFWD2Q8NHY2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFWD2Q8NHY2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RFWD2Q8NHY2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RFWD2Q8NHY2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFWD2Q8NHY2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFWD2Q8NHY2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RFWD2Q8NHY2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RFWD2Q8NHY2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RFWD2Q8NHY2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.93■□□□□ 0.94
RFWD2Q8NHY2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
RFWD2Q8NHY2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFWD2Q8NHY2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.93■□□□□ 0.94
RFWD2Q8NHY2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.93■□□□□ 0.94
RFWD2Q8NHY2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RFWD2Q8NHY2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFWD2Q8NHY2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFWD2Q8NHY2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RFWD2Q8NHY2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFWD2Q8NHY2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFWD2Q8NHY2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFWD2Q8NHY2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFWD2Q8NHY2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFWD2Q8NHY2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFWD2Q8NHY2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFWD2Q8NHY2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFWD2Q8NHY2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.92■□□□□ 0.94
RFWD2Q8NHY2 AC009299.2-201ENST00000482477 511 ntBASIC20.92■□□□□ 0.94
RFWD2Q8NHY2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.92■□□□□ 0.94
RFWD2Q8NHY2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RFWD2Q8NHY2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFWD2Q8NHY2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms