Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLHC1Q8NHS4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLHC1Q8NHS4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.38■□□□□ 0.85
CLHC1Q8NHS4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.38■□□□□ 0.85
CLHC1Q8NHS4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.38■□□□□ 0.85
CLHC1Q8NHS4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CLHC1Q8NHS4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLHC1Q8NHS4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.38■□□□□ 0.85
CLHC1Q8NHS4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.38■□□□□ 0.85
CLHC1Q8NHS4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.38■□□□□ 0.85
CLHC1Q8NHS4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLHC1Q8NHS4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLHC1Q8NHS4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.38■□□□□ 0.85
CLHC1Q8NHS4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLHC1Q8NHS4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
CLHC1Q8NHS4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLHC1Q8NHS4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLHC1Q8NHS4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLHC1Q8NHS4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.37■□□□□ 0.85
CLHC1Q8NHS4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLHC1Q8NHS4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.37■□□□□ 0.85
CLHC1Q8NHS4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.37■□□□□ 0.85
CLHC1Q8NHS4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.37■□□□□ 0.85
CLHC1Q8NHS4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CLHC1Q8NHS4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLHC1Q8NHS4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLHC1Q8NHS4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLHC1Q8NHS4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLHC1Q8NHS4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLHC1Q8NHS4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CLHC1Q8NHS4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLHC1Q8NHS4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLHC1Q8NHS4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLHC1Q8NHS4 AP005435.1-201ENST00000529293 1178 ntBASIC20.36■□□□□ 0.85
CLHC1Q8NHS4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.36■□□□□ 0.85
CLHC1Q8NHS4 AC131212.1-201ENST00000613771 668 ntBASIC20.36■□□□□ 0.85
CLHC1Q8NHS4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLHC1Q8NHS4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLHC1Q8NHS4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.36■□□□□ 0.85
CLHC1Q8NHS4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CLHC1Q8NHS4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.36■□□□□ 0.85
CLHC1Q8NHS4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.36■□□□□ 0.85
CLHC1Q8NHS4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 MIR4767-201ENST00000582827 78 ntBASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLHC1Q8NHS4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLHC1Q8NHS4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLHC1Q8NHS4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLHC1Q8NHS4 UNC93B3-201ENST00000308076 687 ntBASIC20.34■□□□□ 0.85
CLHC1Q8NHS4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CLHC1Q8NHS4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.34■□□□□ 0.85
CLHC1Q8NHS4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.34■□□□□ 0.85
CLHC1Q8NHS4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLHC1Q8NHS4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLHC1Q8NHS4 AC003102.1-202ENST00000563394 1796 ntBASIC20.34■□□□□ 0.85
CLHC1Q8NHS4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.34■□□□□ 0.85
CLHC1Q8NHS4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLHC1Q8NHS4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLHC1Q8NHS4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLHC1Q8NHS4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CLHC1Q8NHS4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.33■□□□□ 0.85
CLHC1Q8NHS4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLHC1Q8NHS4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLHC1Q8NHS4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLHC1Q8NHS4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLHC1Q8NHS4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CLHC1Q8NHS4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.33■□□□□ 0.84
CLHC1Q8NHS4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CLHC1Q8NHS4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.32■□□□□ 0.84
CLHC1Q8NHS4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLHC1Q8NHS4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLHC1Q8NHS4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CLHC1Q8NHS4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CLHC1Q8NHS4 AL034346.1-201ENST00000568244 1277 ntBASIC20.32■□□□□ 0.84
CLHC1Q8NHS4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLHC1Q8NHS4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLHC1Q8NHS4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLHC1Q8NHS4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLHC1Q8NHS4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CLHC1Q8NHS4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLHC1Q8NHS4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms