Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NUP43Q8NFH3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.91■□□□□ 0.78
NUP43Q8NFH3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.91■□□□□ 0.78
NUP43Q8NFH3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.91■□□□□ 0.78
NUP43Q8NFH3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUP43Q8NFH3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUP43Q8NFH3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUP43Q8NFH3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.9■□□□□ 0.78
NUP43Q8NFH3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUP43Q8NFH3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUP43Q8NFH3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.9■□□□□ 0.78
NUP43Q8NFH3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUP43Q8NFH3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUP43Q8NFH3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
NUP43Q8NFH3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUP43Q8NFH3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
NUP43Q8NFH3 AC005837.3-201ENST00000612163 286 ntBASIC19.9■□□□□ 0.78
NUP43Q8NFH3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUP43Q8NFH3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUP43Q8NFH3 AC009237.3-201ENST00000393279 1427 ntBASIC19.9■□□□□ 0.78
NUP43Q8NFH3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUP43Q8NFH3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUP43Q8NFH3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.9■□□□□ 0.78
NUP43Q8NFH3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUP43Q8NFH3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUP43Q8NFH3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUP43Q8NFH3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
NUP43Q8NFH3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUP43Q8NFH3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.89■□□□□ 0.77
NUP43Q8NFH3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUP43Q8NFH3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUP43Q8NFH3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.89■□□□□ 0.77
NUP43Q8NFH3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUP43Q8NFH3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
NUP43Q8NFH3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.89■□□□□ 0.77
NUP43Q8NFH3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.89■□□□□ 0.77
NUP43Q8NFH3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.89■□□□□ 0.77
NUP43Q8NFH3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUP43Q8NFH3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUP43Q8NFH3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUP43Q8NFH3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.88■□□□□ 0.77
NUP43Q8NFH3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.88■□□□□ 0.77
NUP43Q8NFH3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUP43Q8NFH3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NUP43Q8NFH3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUP43Q8NFH3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.88■□□□□ 0.77
NUP43Q8NFH3 AL137060.1-201ENST00000618151 2648 ntBASIC19.88■□□□□ 0.77
NUP43Q8NFH3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUP43Q8NFH3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.88■□□□□ 0.77
NUP43Q8NFH3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUP43Q8NFH3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
NUP43Q8NFH3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.88■□□□□ 0.77
NUP43Q8NFH3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUP43Q8NFH3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.87■□□□□ 0.77
NUP43Q8NFH3 BX005040.4-201ENST00000637145 1518 ntBASIC19.87■□□□□ 0.77
NUP43Q8NFH3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NUP43Q8NFH3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NUP43Q8NFH3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NUP43Q8NFH3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NUP43Q8NFH3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NUP43Q8NFH3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.87■□□□□ 0.77
NUP43Q8NFH3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NUP43Q8NFH3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NUP43Q8NFH3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NUP43Q8NFH3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NUP43Q8NFH3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NUP43Q8NFH3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NUP43Q8NFH3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUP43Q8NFH3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.86■□□□□ 0.77
NUP43Q8NFH3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NUP43Q8NFH3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUP43Q8NFH3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUP43Q8NFH3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
NUP43Q8NFH3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.86■□□□□ 0.77
NUP43Q8NFH3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
NUP43Q8NFH3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.86■□□□□ 0.77
NUP43Q8NFH3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NUP43Q8NFH3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.86■□□□□ 0.77
NUP43Q8NFH3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NUP43Q8NFH3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.85■□□□□ 0.77
NUP43Q8NFH3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUP43Q8NFH3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.85■□□□□ 0.77
NUP43Q8NFH3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
NUP43Q8NFH3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
NUP43Q8NFH3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NUP43Q8NFH3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUP43Q8NFH3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NUP43Q8NFH3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUP43Q8NFH3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.85■□□□□ 0.77
NUP43Q8NFH3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NUP43Q8NFH3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.85■□□□□ 0.77
NUP43Q8NFH3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.85■□□□□ 0.77
NUP43Q8NFH3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.85■□□□□ 0.77
NUP43Q8NFH3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUP43Q8NFH3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
NUP43Q8NFH3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.85■□□□□ 0.77
NUP43Q8NFH3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.85■□□□□ 0.77
NUP43Q8NFH3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.85■□□□□ 0.77
NUP43Q8NFH3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NUP43Q8NFH3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms