Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.7■□□□□ 0.58
DTX3Q8N9I9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.7■□□□□ 0.58
DTX3Q8N9I9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DTX3Q8N9I9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DTX3Q8N9I9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DTX3Q8N9I9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DTX3Q8N9I9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DTX3Q8N9I9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.7■□□□□ 0.58
DTX3Q8N9I9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DTX3Q8N9I9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.7■□□□□ 0.58
DTX3Q8N9I9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.69■□□□□ 0.58
DTX3Q8N9I9 LINC01529-204ENST00000636474 1715 ntBASIC18.69■□□□□ 0.58
DTX3Q8N9I9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
DTX3Q8N9I9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DTX3Q8N9I9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DTX3Q8N9I9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.69■□□□□ 0.58
DTX3Q8N9I9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DTX3Q8N9I9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.69■□□□□ 0.58
DTX3Q8N9I9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DTX3Q8N9I9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
DTX3Q8N9I9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
DTX3Q8N9I9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
DTX3Q8N9I9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.69■□□□□ 0.58
DTX3Q8N9I9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DTX3Q8N9I9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DTX3Q8N9I9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DTX3Q8N9I9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DTX3Q8N9I9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DTX3Q8N9I9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DTX3Q8N9I9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DTX3Q8N9I9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DTX3Q8N9I9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.68■□□□□ 0.58
DTX3Q8N9I9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DTX3Q8N9I9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DTX3Q8N9I9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.68■□□□□ 0.58
DTX3Q8N9I9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.68■□□□□ 0.58
DTX3Q8N9I9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.68■□□□□ 0.58
DTX3Q8N9I9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.68■□□□□ 0.58
DTX3Q8N9I9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DTX3Q8N9I9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
DTX3Q8N9I9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DTX3Q8N9I9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DTX3Q8N9I9 AC007952.6-201ENST00000573168 2673 ntBASIC18.67■□□□□ 0.58
DTX3Q8N9I9 AC003957.1-201ENST00000625108 2673 ntBASIC18.67■□□□□ 0.58
DTX3Q8N9I9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DTX3Q8N9I9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
DTX3Q8N9I9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
DTX3Q8N9I9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DTX3Q8N9I9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DTX3Q8N9I9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
DTX3Q8N9I9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.67■□□□□ 0.58
DTX3Q8N9I9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DTX3Q8N9I9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
DTX3Q8N9I9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
DTX3Q8N9I9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
DTX3Q8N9I9 MIR4281-201ENST00000580852 62 ntBASIC18.67■□□□□ 0.58
DTX3Q8N9I9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.67■□□□□ 0.58
DTX3Q8N9I9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.67■□□□□ 0.58
DTX3Q8N9I9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.67■□□□□ 0.58
DTX3Q8N9I9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
DTX3Q8N9I9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.67■□□□□ 0.58
DTX3Q8N9I9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.67■□□□□ 0.58
DTX3Q8N9I9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
DTX3Q8N9I9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.67■□□□□ 0.58
DTX3Q8N9I9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
DTX3Q8N9I9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 KRT16P3-201ENST00000439127 1283 ntBASIC18.66■□□□□ 0.58
DTX3Q8N9I9 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.66■□□□□ 0.58
DTX3Q8N9I9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 AC092028.1-203ENST00000608262 953 ntBASIC18.66■□□□□ 0.58
DTX3Q8N9I9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DTX3Q8N9I9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
DTX3Q8N9I9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DTX3Q8N9I9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DTX3Q8N9I9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DTX3Q8N9I9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms