Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN22Q8N7P3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
CLDN22Q8N7P3 OXCT2P1-201ENST00000447263 1535 ntBASIC19.35■□□□□ 0.69
CLDN22Q8N7P3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CLDN22Q8N7P3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CLDN22Q8N7P3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
CLDN22Q8N7P3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.35■□□□□ 0.69
CLDN22Q8N7P3 LINC01521-201ENST00000504184 1943 ntBASIC19.35■□□□□ 0.69
CLDN22Q8N7P3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN22Q8N7P3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN22Q8N7P3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN22Q8N7P3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN22Q8N7P3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.34■□□□□ 0.69
CLDN22Q8N7P3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.34■□□□□ 0.69
CLDN22Q8N7P3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN22Q8N7P3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN22Q8N7P3 AC131212.1-201ENST00000613771 668 ntBASIC19.34■□□□□ 0.69
CLDN22Q8N7P3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CLDN22Q8N7P3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN22Q8N7P3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN22Q8N7P3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN22Q8N7P3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.34■□□□□ 0.69
CLDN22Q8N7P3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN22Q8N7P3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CLDN22Q8N7P3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN22Q8N7P3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CLDN22Q8N7P3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN22Q8N7P3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN22Q8N7P3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN22Q8N7P3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN22Q8N7P3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN22Q8N7P3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN22Q8N7P3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.33■□□□□ 0.69
CLDN22Q8N7P3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN22Q8N7P3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN22Q8N7P3 AF106564.1-201ENST00000607058 2553 ntBASIC19.33■□□□□ 0.69
CLDN22Q8N7P3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CLDN22Q8N7P3 AL136116.3-201ENST00000402907 1138 ntBASIC19.33■□□□□ 0.68
CLDN22Q8N7P3 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN22Q8N7P3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.33■□□□□ 0.68
CLDN22Q8N7P3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN22Q8N7P3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN22Q8N7P3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN22Q8N7P3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDN22Q8N7P3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN22Q8N7P3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN22Q8N7P3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN22Q8N7P3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN22Q8N7P3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CLDN22Q8N7P3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
CLDN22Q8N7P3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN22Q8N7P3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN22Q8N7P3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN22Q8N7P3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN22Q8N7P3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.32■□□□□ 0.68
CLDN22Q8N7P3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN22Q8N7P3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
CLDN22Q8N7P3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN22Q8N7P3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CLDN22Q8N7P3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CLDN22Q8N7P3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN22Q8N7P3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CLDN22Q8N7P3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN22Q8N7P3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN22Q8N7P3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN22Q8N7P3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CLDN22Q8N7P3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN22Q8N7P3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN22Q8N7P3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN22Q8N7P3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN22Q8N7P3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CLDN22Q8N7P3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CLDN22Q8N7P3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN22Q8N7P3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN22Q8N7P3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN22Q8N7P3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN22Q8N7P3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CLDN22Q8N7P3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN22Q8N7P3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN22Q8N7P3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CLDN22Q8N7P3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN22Q8N7P3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN22Q8N7P3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN22Q8N7P3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CLDN22Q8N7P3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN22Q8N7P3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CLDN22Q8N7P3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN22Q8N7P3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CLDN22Q8N7P3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CLDN22Q8N7P3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN22Q8N7P3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN22Q8N7P3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN22Q8N7P3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN22Q8N7P3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CLDN22Q8N7P3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN22Q8N7P3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN22Q8N7P3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN22Q8N7P3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN22Q8N7P3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN22Q8N7P3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms