Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL27A1Q8IZC6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.29■□□□□ 0.84
COL27A1Q8IZC6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.29■□□□□ 0.84
COL27A1Q8IZC6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL27A1Q8IZC6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.29■□□□□ 0.84
COL27A1Q8IZC6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL27A1Q8IZC6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL27A1Q8IZC6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL27A1Q8IZC6 AC137767.1-201ENST00000602918 1920 ntBASIC20.29■□□□□ 0.84
COL27A1Q8IZC6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.29■□□□□ 0.84
COL27A1Q8IZC6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.28■□□□□ 0.84
COL27A1Q8IZC6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL27A1Q8IZC6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL27A1Q8IZC6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL27A1Q8IZC6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL27A1Q8IZC6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL27A1Q8IZC6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.28■□□□□ 0.84
COL27A1Q8IZC6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL27A1Q8IZC6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL27A1Q8IZC6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.28■□□□□ 0.84
COL27A1Q8IZC6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.28■□□□□ 0.84
COL27A1Q8IZC6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.28■□□□□ 0.84
COL27A1Q8IZC6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.28■□□□□ 0.84
COL27A1Q8IZC6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL27A1Q8IZC6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.28■□□□□ 0.84
COL27A1Q8IZC6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL27A1Q8IZC6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL27A1Q8IZC6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL27A1Q8IZC6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.27■□□□□ 0.84
COL27A1Q8IZC6 GCSHP5-201ENST00000443090 522 ntBASIC20.27■□□□□ 0.84
COL27A1Q8IZC6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.27■□□□□ 0.84
COL27A1Q8IZC6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.27■□□□□ 0.84
COL27A1Q8IZC6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
COL27A1Q8IZC6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.27■□□□□ 0.84
COL27A1Q8IZC6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
COL27A1Q8IZC6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL27A1Q8IZC6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COL27A1Q8IZC6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COL27A1Q8IZC6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.26■□□□□ 0.83
COL27A1Q8IZC6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL27A1Q8IZC6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.26■□□□□ 0.83
COL27A1Q8IZC6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.26■□□□□ 0.83
COL27A1Q8IZC6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL27A1Q8IZC6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL27A1Q8IZC6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.26■□□□□ 0.83
COL27A1Q8IZC6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL27A1Q8IZC6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL27A1Q8IZC6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.26■□□□□ 0.83
COL27A1Q8IZC6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL27A1Q8IZC6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.26■□□□□ 0.83
COL27A1Q8IZC6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.26■□□□□ 0.83
COL27A1Q8IZC6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.26■□□□□ 0.83
COL27A1Q8IZC6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.26■□□□□ 0.83
COL27A1Q8IZC6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.26■□□□□ 0.83
COL27A1Q8IZC6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.26■□□□□ 0.83
COL27A1Q8IZC6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.26■□□□□ 0.83
COL27A1Q8IZC6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COL27A1Q8IZC6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL27A1Q8IZC6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
COL27A1Q8IZC6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL27A1Q8IZC6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.25■□□□□ 0.83
COL27A1Q8IZC6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL27A1Q8IZC6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.25■□□□□ 0.83
COL27A1Q8IZC6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.24■□□□□ 0.83
COL27A1Q8IZC6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL27A1Q8IZC6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL27A1Q8IZC6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.24■□□□□ 0.83
COL27A1Q8IZC6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.24■□□□□ 0.83
COL27A1Q8IZC6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.24■□□□□ 0.83
COL27A1Q8IZC6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL27A1Q8IZC6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL27A1Q8IZC6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL27A1Q8IZC6 AC139530.1-201ENST00000575312 1977 ntBASIC20.24■□□□□ 0.83
COL27A1Q8IZC6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL27A1Q8IZC6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.24■□□□□ 0.83
COL27A1Q8IZC6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.24■□□□□ 0.83
COL27A1Q8IZC6 UNC93B5-201ENST00000530315 699 ntBASIC20.24■□□□□ 0.83
COL27A1Q8IZC6 AC243732.1-201ENST00000612648 864 ntBASIC20.24■□□□□ 0.83
COL27A1Q8IZC6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.24■□□□□ 0.83
COL27A1Q8IZC6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL27A1Q8IZC6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL27A1Q8IZC6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL27A1Q8IZC6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.23■□□□□ 0.83
COL27A1Q8IZC6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL27A1Q8IZC6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL27A1Q8IZC6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.23■□□□□ 0.83
COL27A1Q8IZC6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL27A1Q8IZC6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL27A1Q8IZC6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL27A1Q8IZC6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
COL27A1Q8IZC6 AC061975.6-201ENST00000579045 1553 ntBASIC20.22■□□□□ 0.83
COL27A1Q8IZC6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL27A1Q8IZC6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL27A1Q8IZC6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.22■□□□□ 0.83
COL27A1Q8IZC6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.22■□□□□ 0.83
COL27A1Q8IZC6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.22■□□□□ 0.83
COL27A1Q8IZC6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL27A1Q8IZC6 AC008175.2-201ENST00000612840 297 ntBASIC20.22■□□□□ 0.83
COL27A1Q8IZC6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.22■□□□□ 0.83
COL27A1Q8IZC6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms