Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC116Q8IYX3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC116Q8IYX3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CCDC116Q8IYX3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC116Q8IYX3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC116Q8IYX3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC116Q8IYX3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC116Q8IYX3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC116Q8IYX3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC116Q8IYX3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC116Q8IYX3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC116Q8IYX3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CCDC116Q8IYX3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC116Q8IYX3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC116Q8IYX3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.04■□□□□ 0.8
CCDC116Q8IYX3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC116Q8IYX3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC116Q8IYX3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC116Q8IYX3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC116Q8IYX3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC116Q8IYX3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC116Q8IYX3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC116Q8IYX3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC116Q8IYX3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC116Q8IYX3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CCDC116Q8IYX3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC116Q8IYX3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC116Q8IYX3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC116Q8IYX3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC116Q8IYX3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC116Q8IYX3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC116Q8IYX3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC116Q8IYX3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC116Q8IYX3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CCDC116Q8IYX3 IRS3P-201ENST00000223076 1006 ntBASIC20.02■□□□□ 0.8
CCDC116Q8IYX3 AC012414.1-201ENST00000556676 535 ntBASIC20.02■□□□□ 0.8
CCDC116Q8IYX3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC116Q8IYX3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC116Q8IYX3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC116Q8IYX3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC116Q8IYX3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC116Q8IYX3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC116Q8IYX3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CCDC116Q8IYX3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.02■□□□□ 0.79
CCDC116Q8IYX3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC116Q8IYX3 AC026310.3-201ENST00000625186 2373 ntBASIC20.01■□□□□ 0.79
CCDC116Q8IYX3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CCDC116Q8IYX3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CCDC116Q8IYX3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC116Q8IYX3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CCDC116Q8IYX3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC116Q8IYX3 AL354811.1-201ENST00000610286 706 ntBASIC20.01■□□□□ 0.79
CCDC116Q8IYX3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC116Q8IYX3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC116Q8IYX3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC116Q8IYX3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CCDC116Q8IYX3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC116Q8IYX3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20■□□□□ 0.79
CCDC116Q8IYX3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC116Q8IYX3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC116Q8IYX3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC116Q8IYX3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20■□□□□ 0.79
CCDC116Q8IYX3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20■□□□□ 0.79
CCDC116Q8IYX3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20■□□□□ 0.79
CCDC116Q8IYX3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CCDC116Q8IYX3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CCDC116Q8IYX3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20■□□□□ 0.79
CCDC116Q8IYX3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20■□□□□ 0.79
CCDC116Q8IYX3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC116Q8IYX3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CCDC116Q8IYX3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20■□□□□ 0.79
CCDC116Q8IYX3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC116Q8IYX3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC116Q8IYX3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC116Q8IYX3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC116Q8IYX3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC116Q8IYX3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC116Q8IYX3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC116Q8IYX3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC116Q8IYX3 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC116Q8IYX3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC116Q8IYX3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC116Q8IYX3 MIR6084-201ENST00000622012 110 ntBASIC19.99■□□□□ 0.79
CCDC116Q8IYX3 AL358852.1-201ENST00000623174 1268 ntBASIC19.99■□□□□ 0.79
CCDC116Q8IYX3 AC005224.4-201ENST00000583262 1652 ntBASIC19.99■□□□□ 0.79
CCDC116Q8IYX3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CCDC116Q8IYX3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC116Q8IYX3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC116Q8IYX3 Z98882.1-201ENST00000622160 2253 ntBASIC19.99■□□□□ 0.79
CCDC116Q8IYX3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC116Q8IYX3 AL137060.1-201ENST00000618151 2648 ntBASIC19.98■□□□□ 0.79
CCDC116Q8IYX3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC116Q8IYX3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC116Q8IYX3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC116Q8IYX3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
CCDC116Q8IYX3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.98■□□□□ 0.79
CCDC116Q8IYX3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC116Q8IYX3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CCDC116Q8IYX3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC116Q8IYX3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms