Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF135Q8IUD6 PPP1R14BP2-201ENST00000426284 444 ntBASIC22.53■■□□□ 1.2
RNF135Q8IUD6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.53■■□□□ 1.2
RNF135Q8IUD6 RPS2P4-201ENST00000476944 856 ntBASIC22.53■■□□□ 1.2
RNF135Q8IUD6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.53■■□□□ 1.2
RNF135Q8IUD6 AP001160.3-201ENST00000601484 763 ntBASIC22.53■■□□□ 1.2
RNF135Q8IUD6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.53■■□□□ 1.2
RNF135Q8IUD6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF135Q8IUD6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF135Q8IUD6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.53■■□□□ 1.2
RNF135Q8IUD6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF135Q8IUD6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF135Q8IUD6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
RNF135Q8IUD6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF135Q8IUD6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RNF135Q8IUD6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RNF135Q8IUD6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.52■■□□□ 1.2
RNF135Q8IUD6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF135Q8IUD6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF135Q8IUD6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22.52■■□□□ 1.2
RNF135Q8IUD6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF135Q8IUD6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF135Q8IUD6 MIPEPP3-201ENST00000412105 444 ntBASIC22.52■■□□□ 1.2
RNF135Q8IUD6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.52■■□□□ 1.2
RNF135Q8IUD6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF135Q8IUD6 AC004687.1-201ENST00000579003 1625 ntBASIC22.52■■□□□ 1.2
RNF135Q8IUD6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF135Q8IUD6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RNF135Q8IUD6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RNF135Q8IUD6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RNF135Q8IUD6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF135Q8IUD6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF135Q8IUD6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF135Q8IUD6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF135Q8IUD6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
RNF135Q8IUD6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
RNF135Q8IUD6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
RNF135Q8IUD6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
RNF135Q8IUD6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.51■■□□□ 1.19
RNF135Q8IUD6 AL158047.1-201ENST00000445918 881 ntBASIC22.51■■□□□ 1.19
RNF135Q8IUD6 RARRES2P4-201ENST00000514074 484 ntBASIC22.51■■□□□ 1.19
RNF135Q8IUD6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF135Q8IUD6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
RNF135Q8IUD6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF135Q8IUD6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.51■■□□□ 1.19
RNF135Q8IUD6 AC005224.4-201ENST00000583262 1652 ntBASIC22.51■■□□□ 1.19
RNF135Q8IUD6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
RNF135Q8IUD6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF135Q8IUD6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF135Q8IUD6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF135Q8IUD6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
RNF135Q8IUD6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF135Q8IUD6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF135Q8IUD6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF135Q8IUD6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.5■■□□□ 1.19
RNF135Q8IUD6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF135Q8IUD6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.5■■□□□ 1.19
RNF135Q8IUD6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RNF135Q8IUD6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RNF135Q8IUD6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
RNF135Q8IUD6 AC012676.1-201ENST00000574705 1949 ntBASIC22.5■■□□□ 1.19
RNF135Q8IUD6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.5■■□□□ 1.19
RNF135Q8IUD6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.5■■□□□ 1.19
RNF135Q8IUD6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF135Q8IUD6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.5■■□□□ 1.19
RNF135Q8IUD6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.49■■□□□ 1.19
RNF135Q8IUD6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RNF135Q8IUD6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF135Q8IUD6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF135Q8IUD6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF135Q8IUD6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF135Q8IUD6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.49■■□□□ 1.19
RNF135Q8IUD6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.49■■□□□ 1.19
RNF135Q8IUD6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF135Q8IUD6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.49■■□□□ 1.19
RNF135Q8IUD6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
RNF135Q8IUD6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF135Q8IUD6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.49■■□□□ 1.19
RNF135Q8IUD6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RNF135Q8IUD6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF135Q8IUD6 DUSP8P3-201ENST00000399571 1760 ntBASIC22.48■■□□□ 1.19
RNF135Q8IUD6 OXCT2P1-201ENST00000447263 1535 ntBASIC22.48■■□□□ 1.19
RNF135Q8IUD6 ESRRAP1-201ENST00000400596 1257 ntBASIC22.48■■□□□ 1.19
RNF135Q8IUD6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.48■■□□□ 1.19
RNF135Q8IUD6 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.48■■□□□ 1.19
RNF135Q8IUD6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.48■■□□□ 1.19
RNF135Q8IUD6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.48■■□□□ 1.19
RNF135Q8IUD6 AC010536.3-201ENST00000620306 533 ntBASIC22.48■■□□□ 1.19
RNF135Q8IUD6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF135Q8IUD6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF135Q8IUD6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF135Q8IUD6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF135Q8IUD6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.48■■□□□ 1.19
RNF135Q8IUD6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.48■■□□□ 1.19
RNF135Q8IUD6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.48■■□□□ 1.19
RNF135Q8IUD6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RNF135Q8IUD6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF135Q8IUD6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RNF135Q8IUD6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF135Q8IUD6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms