Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TREML4Q6UXN2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TREML4Q6UXN2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.35■□□□□ 0.37
TREML4Q6UXN2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TREML4Q6UXN2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TREML4Q6UXN2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TREML4Q6UXN2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.35■□□□□ 0.37
TREML4Q6UXN2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TREML4Q6UXN2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREML4Q6UXN2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREML4Q6UXN2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREML4Q6UXN2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TREML4Q6UXN2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TREML4Q6UXN2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TREML4Q6UXN2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TREML4Q6UXN2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREML4Q6UXN2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.34■□□□□ 0.37
TREML4Q6UXN2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.34■□□□□ 0.37
TREML4Q6UXN2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TREML4Q6UXN2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.34■□□□□ 0.37
TREML4Q6UXN2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.34■□□□□ 0.37
TREML4Q6UXN2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TREML4Q6UXN2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TREML4Q6UXN2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TREML4Q6UXN2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TREML4Q6UXN2 LINC01529-204ENST00000636474 1715 ntBASIC17.33■□□□□ 0.37
TREML4Q6UXN2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
TREML4Q6UXN2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.33■□□□□ 0.37
TREML4Q6UXN2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.33■□□□□ 0.37
TREML4Q6UXN2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TREML4Q6UXN2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.33■□□□□ 0.36
TREML4Q6UXN2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TREML4Q6UXN2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TREML4Q6UXN2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TREML4Q6UXN2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TREML4Q6UXN2 AC104771.1-201ENST00000603335 964 ntBASIC17.33■□□□□ 0.36
TREML4Q6UXN2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TREML4Q6UXN2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.33■□□□□ 0.36
TREML4Q6UXN2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.33■□□□□ 0.36
TREML4Q6UXN2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.33■□□□□ 0.36
TREML4Q6UXN2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TREML4Q6UXN2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TREML4Q6UXN2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TREML4Q6UXN2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.33■□□□□ 0.36
TREML4Q6UXN2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TREML4Q6UXN2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TREML4Q6UXN2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TREML4Q6UXN2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TREML4Q6UXN2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TREML4Q6UXN2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TREML4Q6UXN2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TREML4Q6UXN2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TREML4Q6UXN2 AL355802.2-201ENST00000402069 882 ntBASIC17.32■□□□□ 0.36
TREML4Q6UXN2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TREML4Q6UXN2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TREML4Q6UXN2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TREML4Q6UXN2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TREML4Q6UXN2 LINC01960-201ENST00000563759 1884 ntBASIC17.32■□□□□ 0.36
TREML4Q6UXN2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
TREML4Q6UXN2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.32■□□□□ 0.36
TREML4Q6UXN2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.32■□□□□ 0.36
TREML4Q6UXN2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TREML4Q6UXN2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TREML4Q6UXN2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
TREML4Q6UXN2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.31■□□□□ 0.36
TREML4Q6UXN2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TREML4Q6UXN2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TREML4Q6UXN2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.31■□□□□ 0.36
TREML4Q6UXN2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.31■□□□□ 0.36
TREML4Q6UXN2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.31■□□□□ 0.36
TREML4Q6UXN2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.31■□□□□ 0.36
TREML4Q6UXN2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.31■□□□□ 0.36
TREML4Q6UXN2 CDCA4P2-201ENST00000441182 718 ntBASIC17.31■□□□□ 0.36
TREML4Q6UXN2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.31■□□□□ 0.36
TREML4Q6UXN2 RAP2CP1-201ENST00000605103 478 ntBASIC17.31■□□□□ 0.36
TREML4Q6UXN2 AC066615.1-201ENST00000640911 628 ntBASIC17.31■□□□□ 0.36
TREML4Q6UXN2 AC073111.5-205ENST00000641717 521 ntBASIC17.31■□□□□ 0.36
TREML4Q6UXN2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TREML4Q6UXN2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TREML4Q6UXN2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TREML4Q6UXN2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TREML4Q6UXN2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TREML4Q6UXN2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.31■□□□□ 0.36
TREML4Q6UXN2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TREML4Q6UXN2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TREML4Q6UXN2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
TREML4Q6UXN2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
TREML4Q6UXN2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.3■□□□□ 0.36
TREML4Q6UXN2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TREML4Q6UXN2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TREML4Q6UXN2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TREML4Q6UXN2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.3■□□□□ 0.36
TREML4Q6UXN2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.3■□□□□ 0.36
TREML4Q6UXN2 AC006015.1-201ENST00000429970 570 ntBASIC17.3■□□□□ 0.36
TREML4Q6UXN2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TREML4Q6UXN2 AC026185.1-201ENST00000445748 174 ntBASIC17.3■□□□□ 0.36
TREML4Q6UXN2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TREML4Q6UXN2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TREML4Q6UXN2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.3■□□□□ 0.36
TREML4Q6UXN2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms