Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AC133637.1-201ENST00000624115 1537 ntBASIC19.32■□□□□ 0.68
TMEM53Q6P2H8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM53Q6P2H8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM53Q6P2H8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM53Q6P2H8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM53Q6P2H8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM53Q6P2H8 SERBP1P1-201ENST00000396021 1160 ntBASIC19.32■□□□□ 0.68
TMEM53Q6P2H8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.32■□□□□ 0.68
TMEM53Q6P2H8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.32■□□□□ 0.68
TMEM53Q6P2H8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM53Q6P2H8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM53Q6P2H8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM53Q6P2H8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM53Q6P2H8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
TMEM53Q6P2H8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM53Q6P2H8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM53Q6P2H8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TMEM53Q6P2H8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TMEM53Q6P2H8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM53Q6P2H8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM53Q6P2H8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM53Q6P2H8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
TMEM53Q6P2H8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM53Q6P2H8 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM53Q6P2H8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.31■□□□□ 0.68
TMEM53Q6P2H8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM53Q6P2H8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.31■□□□□ 0.68
TMEM53Q6P2H8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM53Q6P2H8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM53Q6P2H8 AC004687.1-201ENST00000579003 1625 ntBASIC19.31■□□□□ 0.68
TMEM53Q6P2H8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM53Q6P2H8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
TMEM53Q6P2H8 LINC01521-201ENST00000504184 1943 ntBASIC19.31■□□□□ 0.68
TMEM53Q6P2H8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM53Q6P2H8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 AC087289.5-201ENST00000586076 3175 ntBASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM53Q6P2H8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM53Q6P2H8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM53Q6P2H8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM53Q6P2H8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TMEM53Q6P2H8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM53Q6P2H8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM53Q6P2H8 UNC93B3-201ENST00000308076 687 ntBASIC19.29■□□□□ 0.68
TMEM53Q6P2H8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM53Q6P2H8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.29■□□□□ 0.68
TMEM53Q6P2H8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TMEM53Q6P2H8 AC011298.3-201ENST00000615796 283 ntBASIC19.29■□□□□ 0.68
TMEM53Q6P2H8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM53Q6P2H8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TMEM53Q6P2H8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TMEM53Q6P2H8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TMEM53Q6P2H8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM53Q6P2H8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM53Q6P2H8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM53Q6P2H8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM53Q6P2H8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM53Q6P2H8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM53Q6P2H8 AL157384.1-201ENST00000445995 2473 ntBASIC19.28■□□□□ 0.68
TMEM53Q6P2H8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TMEM53Q6P2H8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM53Q6P2H8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM53Q6P2H8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TMEM53Q6P2H8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.28■□□□□ 0.68
TMEM53Q6P2H8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM53Q6P2H8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM53Q6P2H8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM53Q6P2H8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM53Q6P2H8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM53Q6P2H8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM53Q6P2H8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM53Q6P2H8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM53Q6P2H8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM53Q6P2H8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM53Q6P2H8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM53Q6P2H8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM53Q6P2H8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.27■□□□□ 0.68
TMEM53Q6P2H8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM53Q6P2H8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms